Evidence map›Paper›PMID 31082441›Full record

ReviewJournal of molecular biology2019

Recent Advances in Understanding σ70-Dependent Transcription Initiation Mechanisms.

Abhishek Mazumder, Achillefs N Kapanidis

Abstract readReview
In one paragraph

Review in Journal of molecular biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 49 papers.

0numbers the graph read from it
0cells of the map it votes in
49citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

49 citing papers in PubMed.

  1. Actuation of CRP activating region 3 by formylation modulates theProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
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  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Subunit specialization in AAA+ proteins and substrate unfolding during transcription complex remodeling.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Review
  14. The sigma factor σFrontiers in microbiology · 2025
    Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. DNA looping mediates cooperative transcription activation.Nature structural & molecular biology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Abhishek MazumderBiological Physics Research Group, Clarendon Laboratory, Department of Physics, University of Oxford, Oxford, UK. Electronic address: abhishek.mazumder@physics.ox.ac.uk.
Achillefs N KapanidisBiological Physics Research Group, Clarendon Laboratory, Department of Physics, University of Oxford, Oxford, UK. Electronic address: kapanidis@physics.ox.ac.uk.

Funding

TRANSCRIPTION ACTIVATION BY CAPR01GM041376 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI RICHARD H. EBRIGHT · 1989 to 2026
$6.5M
BACTERIAL TRANSCRIPTION COMPLEXESR37GM041376 · NIGMS · RUTGERS, THE STATE UNIV OF N.J. · PI EBRIGHT, RICHARD H. · 2013 to 2022
$5.0M
Biotechnology and Biological Sciences Research Council BB/H01795X/1Biotechnology and Biological Sciences Research Council BB/J00054X/1NIGMS NIH HHS R01 GM041376NIGMS NIH HHS R37 GM041376Wellcome TrustWellcome Trust 110164/Z/15/Z
6 · The paper itself

Abstract

Prokaryotic transcription is one of the most studied biological systems, with relevance to many fields including the development and use of antibiotics, the construction of synthetic gene networks, and the development of many cutting-edge methodologies. Here, we discuss recent structural, biochemical, and single-molecule biophysical studies targeting the mechanisms of transcription initiation in bacteria, including the formation of the open complex, the reaction of initial transcription, and the promoter escape step that leads to elongation. We specifically focus on the mechanisms employed by the RNA polymerase holoenzyme with the housekeeping sigma factor σ

Indexed as

Transcription Initiation, GeneticBacteriaDNA, BacterialDNA-Directed RNA PolymerasesMultienzyme ComplexesPromoter Regions, GeneticSigma FactorDNA, BacterialDNA-Directed RNA PolymerasesMultienzyme ComplexesRNA polymerase sigma 70Sigma Factor

Identifiers

PMID31082441
PMCPMC7057261

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.