Evidence map›Paper›PMID 31082191›Full record

ArticleACS chemical biology2019

Inhibition of Human DNA Polymerases Eta and Kappa by Indole-Derived Molecules Occurs through Distinct Mechanisms.

Amit Ketkar, Leena Maddukuri, Narsimha R Penthala, Megan R Reed, Maroof K Zafar, Peter A Crooks, Robert L Eoff

Open access · greenAbstract read
In one paragraph

Article in ACS chemical biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Review
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Mammalian DNA Polymerase Kappa Activity and Specificity.Molecules (Basel, Switzerland) · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Amit KetkarDepartment of Biochemistry and Molecular Biology , University of Arkansas for Medical Sciences , Little Rock , Arkansas 72205-7199 , United States.
Leena MaddukuriDepartment of Biochemistry and Molecular Biology , University of Arkansas for Medical Sciences , Little Rock , Arkansas 72205-7199 , United States.
Narsimha R PenthalaDepartment of Pharmaceutical Sciences , University of Arkansas for Medical Sciences , Little Rock , Arkansas 72205-7199 , United States.
Megan R ReedDepartment of Biochemistry and Molecular Biology , University of Arkansas for Medical Sciences , Little Rock , Arkansas 72205-7199 , United States.
Maroof K ZafarDepartment of Biochemistry and Molecular Biology , University of Arkansas for Medical Sciences , Little Rock , Arkansas 72205-7199 , United States.
Peter A CrooksDepartment of Pharmaceutical Sciences , University of Arkansas for Medical Sciences , Little Rock , Arkansas 72205-7199 , United States.
Robert L EoffDepartment of Biochemistry and Molecular Biology , University of Arkansas for Medical Sciences , Little Rock , Arkansas 72205-7199 , United States.ORCID 0000-0003-4776-8925
University of Arkansas for Medical Sciences · US

Funding

THE APOE-APP AXIS IN ALZHEIMER PATHOGENESISP01AG012411 · NIA · UNIV OF ARKANSAS FOR MED SCIS · PI SHMOOKLER REIS, ROBERT JOSEPH · 1995 to 2020
$25.0M
The Role o f Tetrahydrobiopterin (BH4) Bioavailability in Radiation-induced Skin InjuryP20GM109005 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI BOERMA, MARJAN · 2015 to 2024
$21.1M
Translesion DNA polymerase kappa activity in gliomasR01CA183895 · NCI · UNIV OF ARKANSAS FOR MED SCIS · PI EOFF, ROBERT L · 2014 to 2018
$1.5M
NCI NIH HHS R01 CA183895NIA NIH HHS P01 AG012411NIGMS NIH HHS P20 GM109005
6 · The paper itself

Abstract

Overexpression of human DNA polymerase kappa (hpol κ) in glioblastoma is associated with shorter survival time and resistance to the alkylating agent temozolomide (TMZ), making it an attractive target for the development of small-molecule inhibitors. We previously reported on the development and characterization of indole barbituric acid-derived (IBA) inhibitors of translesion DNA synthesis polymerases (TLS pols). We have now identified a potent and selective inhibitor of hpol κ based on the indole-aminoguanidine (IAG) chemical scaffold. The most promising IAG analogue, IAG-10, exhibited greater inhibitory action against hpol κ than any other human Y-family member, as well as pols from the A-, B-, and X-families. Inhibition of hpol κ by IAG analogues appears to proceed through a mechanism that is distinct from inhibition of hpol η based on changes in DNA binding affinity and nucleotide insertion kinetics. By way of comparison, both IAG and IBA analogues inhibited binary complex formation by hpol κ and ternary complex formation by hpol η. Decreasing the concentration of enzyme and DNA in the reaction mixture lowered the IC

Indexed as

AlkylationDNA DamageDNA-Directed DNA PolymeraseEnzyme InhibitorsHumansIndolesInhibitory Concentration 50Y-Family DNA PolymerasesDNA-Directed DNA PolymeraseEnzyme InhibitorsIndolesPOLK protein, humanRad30 proteinY-Family DNA Polymerases

Identifiers

PMID31082191
PMCPMC7357868
OpenAlexW2946514246

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.