Evidence map›Paper›PMID 31081147›Full record

ArticleJournal of cellular biochemistry2019

Gene regulation analysis of the effects of evodiamine on tongue squamous cell carcinoma.

Yuyan Wu, Jing Wang, Jiayuan Zhao, Yunxia Zhang, Yunjie Sun, Jian Chen, Jing Wang

Open access · hybridAbstract read
In one paragraph

Article in Journal of cellular biochemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Research progress on evodiamine, a bioactive alkaloid ofExperimental and therapeutic medicine · 2021
    Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Yuyan WuDepartment of Periodontology, School/Hospital of Stomatology, Lanzhou University, Lanzhou, Gansu, China.ORCID 0000-0001-8640-0387
Jing WangDepartment of Periodontology, School/Hospital of Stomatology, Lanzhou University, Lanzhou, Gansu, China.
Jiayuan ZhaoDepartment of Periodontology, School/Hospital of Stomatology, Lanzhou University, Lanzhou, Gansu, China.
Yunxia ZhangDepartment of Periodontology, School/Hospital of Stomatology, Lanzhou University, Lanzhou, Gansu, China.
Yunjie SunDepartment of Periodontology, School/Hospital of Stomatology, Lanzhou University, Lanzhou, Gansu, China.
Jian ChenDepartment of Pediatric Surgery, The First Hospital of Lznzhou University, Lanzhou, Gansu, China.
Jing WangDepartment of Periodontology, School/Hospital of Stomatology, Lanzhou University, Lanzhou, Gansu, China.
Lanzhou University · CNFirst Hospital of Lanzhou University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveTo use gene chip technology to study the effects of evodiamine (EVO) on the gene expression profile of tongue squamous cell carcinoma (TSCC) CAL-27 cell line, for the purpose of analyzing the mechanisms underlying the effects of EVO on gene expression and functional regulation of TSCC cells at the gene level.

methodDifferentially expressed genes in CAL-27 cells treated with EVO were detected using gene chip technology and analyzed using ingenuity pathway analysis.

resultsMicroarray results showed that there were 1243 differentially expressed genes following treatment with CAL-27 cells; 684 genes were upregulated and 559 were downregulated. Classical pathway analysis revealed a total of 89 signal transduction pathways with upregulated gene set enrichment, including lipopolysaccharide/interleukin (IL)-1-mediated inhibition of retinoid X receptor (RXR) function, agrin interactions at neuromuscular junctions, cholecystokinin/gastrin-mediated signaling, toll-like receptor signaling, and IL-6 signaling. A total of 39 signal transduction pathways were enriched for the downregulated genes, including interferon signals, liver X receptor/RXR activation signals, and RhoGDI signals. In the disease and function analysis, the upregulated genes were enriched in viral infection, RNA virus replication, viral replication, cancer cell invasion, cell invasion, and other related functions, while downregulated genes were enriched in neuromuscular diseases, and leukocyte differentiation, antiviral response, connective tissue cell death and other functions.

conclusionsGene chip analysis offers an effective means of screening differential gene expression between EVO-treated TSCCs and controls, thus providing a sound basis for further research.

Indexed as

Carcinoma, Squamous CellCell Line, TumorCell MovementCell ProliferationGene Expression ProfilingGene Expression Regulation, NeoplasticGene Regulatory NetworksHumansOligonucleotide Array Sequence AnalysisQuinazolinesTongue NeoplasmsevodiamineQuinazolinesbioinformatics analysisevodiaminemolecular mechanismstongue squamous cell carcinoma

Identifiers

PMID31081147
PMCPMC6899695
OpenAlexW2945901813

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.