Evidence map›Paper›PMID 31080783›Full record

ArticleJournal of biological research (Thessalonike, Greece)2019

Comparative analysis of differentially expressed genes between the ovaries from pregnant and nonpregnant goats using RNA-Seq.

Qing Quan, Qi Zheng, Yinghui Ling, Fugui Fang, Mingxing Chu, Xiaorong Zhang, Yong Liu, Wenyong Li

Open access · goldAbstract read
In one paragraph

Article in Journal of biological research (Thessalonike, Greece), 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Qing Quan *1College of Animal Science and Technology, Anhui Agricultural University, Hefei, 230036 Anhui China.
Qi Zheng *1College of Animal Science and Technology, Anhui Agricultural University, Hefei, 230036 Anhui China.
Yinghui Ling1College of Animal Science and Technology, Anhui Agricultural University, Hefei, 230036 Anhui China.
Fugui Fang1College of Animal Science and Technology, Anhui Agricultural University, Hefei, 230036 Anhui China.
Mingxing Chu4Key Laboratory of Farm Animal Genetic Resources and Germplasm Innovation of Ministry of Agriculture, CAAS, Beijing, 100193 China.
Xiaorong Zhang1College of Animal Science and Technology, Anhui Agricultural University, Hefei, 230036 Anhui China.
Yong Liu5Key Laboratory of Embryo Development and Reproductive Regulation of Anhui Province, Fuyang Normal University, Fuyang, Anhui 236037 China.
Wenyong Li5Key Laboratory of Embryo Development and Reproductive Regulation of Anhui Province, Fuyang Normal University, Fuyang, Anhui 236037 China.
Anhui Agricultural University · CNFuyang Normal University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundA multitude of genes tightly regulate ovarian follicular development and hormone secretion. These complex and coordinated biological processes are altered during pregnancy. In order to further understand the regulatory role of these genes during pregnancy, it is important to screen the differentially expressed genes (DEGs) in the ovaries of pregnant and nonpregnant mammals. To detect the genes associated with the development of pregnancy in goats, DEGs from the ovaries from pregnant and nonpregnant Anhui white goats (pAWGs and nAWGs, respectively) were analyzed using RNA sequencing technology (RNA-Seq).

resultsIn this study, 13,676,394 and 13,549,560 clean reads were generated from pAWGs and nAWGs, respectively, and 1724 DEGs were identified between the two libraries. Compared with nAWGs, 1033 genes were upregulated and 691 genes were downregulated in pAWGs, including

conclusionsThe data obtained in this work enrich the genetic resources of goat and provide a further understanding of the complex molecular regulatory mechanisms occurring during the development of pregnancy and reproduction in goats. The DEGs screened in this study may play an important role in follicular development and hormone secretion and they would provide scientific basis for related research in the future.

Indexed as

Differentially expressed genesGoatOvaryPregnant and nonpregnantRNA-Seq

Identifiers

PMID31080783
PMCPMC6503366
OpenAlexW2944295229

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.