Evidence map›Paper›PMID 31078398›Full record

ReviewTrends in biochemical sciences2019

Emerging Roles of DNA Glycosylases and the Base Excision Repair Pathway.

Elwood A Mullins, Alyssa A Rodriguez, Noah P Bradley, Brandt F Eichman

Open access · greenAbstract readReview
In one paragraph

Review in Trends in biochemical sciences, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 65 papers.

0numbers the graph read from it
0cells of the map it votes in
65citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

65 citing papers in PubMed, 106 citations in OpenAlex.

  1. Article
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  16. Mechanisms of DNA repair and mutagenesis induced by acetaldehyde, acrolein, aristolochic acids, and vinyl chloride.Journal of environmental science and health. Part C, Toxicology and carcinogenesis · 2025
    Review
  17. Article
  18. Review
  19. Article
  20. An interstrand DNA crosslink glycosylase aidsProceedings of the National Academy of Sciences of the United States of America · 2024
    Article

5 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Elwood A MullinsDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37232, USA.
Alyssa A RodriguezDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37232, USA.
Noah P BradleyDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37232, USA.
Brandt F EichmanDepartment of Biological Sciences, Vanderbilt University, Nashville, TN 37232, USA; Department of Biochemistry, Vanderbilt University School of Medicine, Nashville, TN 37232, USA. Electronic address: brandt.eichman@vanderbilt.edu.
Vanderbilt University · US

Funding

TRAINING PROGRAM IN ENVIRONMENTAL TOXICOLOGYT32ES007028 · NIEHS · VANDERBILT UNIVERSITY · PI F PETER Guengerich, Fiona Edith Harrison · 1985 to 2026
$15.7M
Vanderbilt/Meharry Initiative for Minority Student DvptR25GM062459 · NIGMS · VANDERBILT UNIVERSITY · PI VELEZ EDWARDS, DIGNA R · 2002 to 2020
$10.4M
MOLECULAR BIOPHYSICS TRAINING PROGRAM AT VANDERBILTT32GM008320 · NIGMS · VANDERBILT UNIVERSITY · PI CHAZIN, WALTER J. · 1989 to 2023
$7.9M
Mechanisms of replication fork repairR01GM117299 · NIGMS · VANDERBILT UNIVERSITY · PI EICHMAN, BRANDT F · 2016 to 2019
$1.2M
Mechanisms of DNA glycosylase mediated interstrand crosslink repairR01GM131071 · NIGMS · VANDERBILT UNIVERSITY · PI EICHMAN, BRANDT F · 2019 to 2019
$465k
NIEHS NIH HHS T32 ES007028NIGMS NIH HHS R01 GM117299NIGMS NIH HHS R01 GM131071NIGMS NIH HHS R25 GM062459NIGMS NIH HHS T32 GM008320
6 · The paper itself

Abstract

The base excision repair (BER) pathway historically has been associated with maintaining genome integrity by eliminating nucleobases with small chemical modifications. In the past several years, however, BER was found to play additional roles in genome maintenance and metabolism, including sequence-specific restriction modification and repair of bulky adducts and interstrand crosslinks. Central to this expanded biological utility are specialized DNA glycosylases - enzymes that selectively excise damaged, modified, or mismatched nucleobases. In this review we discuss the newly identified roles of the BER pathway and examine the structural and mechanistic features of the DNA glycosylases that enable these functions.

Indexed as

DNA RepairDNADNA DamageDNA GlycosylasesHumansDNADNA Glycosylasesbase excision repairDNA damageDNA glycosylaseDNA repairinterstrand crosslinksecondary metabolite

Identifiers

PMID31078398
PMCPMC6699911
OpenAlexW2944522708

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.