Evidence map›Paper›PMID 31077198›Full record

ArticleLipids in health and disease2019

A functional variant rs12904 in the miR-200c binding site was associated with a decreased risk of ischemic stroke.

Zhi-Neng Zeng, Ling-Ling Liu, Yong-Ling He, Xiang Shi, Ye-Sheng Wei

Open access · goldAbstract read
In one paragraph

Article in Lipids in health and disease, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 1 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Zhi-Neng ZengDepartment of Clinical Laboratory, Affiliated Hospital of Guilin Medical University, Guilin, Guangxi, China.
Ling-Ling LiuDepartment of Neonatology, Affiliated Hospital of Guilin Medical University, Guilin, Guangxi, China.
Yong-Ling HeDepartment of Clinical Laboratory, Affiliated Hospital of Guilin Medical University, Guilin, Guangxi, China.
Xiang ShiDepartment of Clinical Laboratory, Affiliated Hospital of Guilin Medical University, Guilin, Guangxi, China.
Ye-Sheng WeiDepartment of Clinical Laboratory, Affiliated Hospital of Guilin Medical University, Guilin, Guangxi, China. wysh22@163.com.
Guilin Medical University · CN

Funding

Key Research Projects of Guangxi 2018AB58018National Natural Science Foundation of China 81560552Natural Science Foundation of Guangxi 2018GXNSFAA138120
6 · The paper itself

Abstract

Genome-wide association study (GWAS) identified chromosome 12p13 rs12425791 and rs11833579 as susceptibility loci of ischemic stroke (IS) in a European population. However, conflicting results were obtained in subsequent replication analysis. miR-200c, located on chromosome 12p13, was found to have a neuroprotective effect on ischemia. Our aim of this study was to investigate the association of the rs12425791, rs11833579 and rs12904 in the binding site of miR-200c with the risk of IS. The rs12425791, rs11833579, and rs12904 were genotyped using a TaqMan allelic discrimination assay. The results were verified by Sanger sequencing. We found that the rs12904 AG/GG genotypes and G allele were associated with a decreased risk of IS (AG/GG vs. AA: adjusted OR = 0.64; 95% CI, 0.44-0.95; G vs. A: adjusted OR = 0.65; 95% CI, 0.46-0.93). The combined genotypes of the rs11833579AG/AA and rs12904AG/GG were also associated with a reduced risk of IS (OR = 0.65; 95% CI, 0.46-0.93). These findings suggest that the rs12904 may have a jointly protective effect against the risk of IS.

Indexed as

Genetic Predisposition to DiseaseBinding SitesBrain IschemiaChromosomes, Human, Pair 12FemaleGenome-Wide Association StudyHaplotypesHumansMaleMicroRNAsMiddle AgedPolymorphism, Single NucleotideRisk FactorsStrokeMicroRNAsMIRN200 microRNA, humanGenome-wide association studyIschemic strokemiR-200cPolymorphism

Identifiers

PMID31077198
PMCPMC6511201
OpenAlexW2947406103

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.