Evidence map›Paper›PMID 31077143›Full record

SynthesisBMC infectious diseases2019

Usefulness of sputum gram stain for etiologic diagnosis in community-acquired pneumonia: a systematic review and meta-analysis.

Gaspar Del Rio-Pertuz, Juan F Gutiérrez, Abel J Triana, Jorge L Molinares, Andrea B Robledo-Solano, José L Meza, Orlando M Ariza-Bolívar, Jorge Acosta-Reyes, Argenis Garavito, Diego Viasus and 1 more

Open access · goldAbstract readEvaluation StudyMeta-AnalysisSystematic Review
In one paragraph

Synthesis in BMC infectious diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 2 pooled it
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 2 syntheses or guidelines pooled it, 51 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Article
  6. Acute management of pneumonia in adult patients.Singapore medical journal · 2023
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Diagnostic Challenges in Sepsis.Current infectious disease reports · 2021
    Review
  17. Response to: Comment on "Antibiotic Resistance Profiles ofThe Canadian journal of infectious diseases & medical microbiology = Journal canadien des maladies infectieuses et de la microbiologie medicale · 2021
    Article
  18. Observational
  19. Community-acquired bacterial pneumonia in adults: An update.The Indian journal of medical research · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Gaspar Del Rio-PertuzFaculty of Medicine, Division of Health Sciences, Hospital Universidad del Norte and Universidad del Norte, Barranquilla, Colombia.
Juan F GutiérrezFaculty of Medicine, Division of Health Sciences, Hospital Universidad del Norte and Universidad del Norte, Barranquilla, Colombia.
Abel J TrianaFaculty of Medicine, Division of Health Sciences, Hospital Universidad del Norte and Universidad del Norte, Barranquilla, Colombia.
Jorge L MolinaresFaculty of Medicine, Division of Health Sciences, Hospital Universidad del Norte and Universidad del Norte, Barranquilla, Colombia.
Andrea B Robledo-SolanoFaculty of Medicine, Division of Health Sciences, Hospital Universidad del Norte and Universidad del Norte, Barranquilla, Colombia.
José L MezaFaculty of Medicine, Division of Health Sciences, Hospital Universidad del Norte and Universidad del Norte, Barranquilla, Colombia.
Orlando M Ariza-BolívarFaculty of Medicine, Division of Health Sciences, Hospital Universidad del Norte and Universidad del Norte, Barranquilla, Colombia.
Jorge Acosta-ReyesFaculty of Public Health, Division of Health Sciences, Universidad del Norte, Barranquilla, Colombia.
Argenis GaravitoClínica Medilaser S.A. - Sucursal Florencia, Fundación Universitaria Navarra, Florencia, Colombia.
Diego ViasusFaculty of Medicine, Division of Health Sciences, Hospital Universidad del Norte and Universidad del Norte, Barranquilla, Colombia. dviasus@uninorte.edu.co.ORCID http://orcid.org/0000-0001-8408-3947
Jordi CarratalàInfectious Disease Department, Hospital Universitari de Bellvitge and Institut d'Investigació Biomèdica de Bellvitge (IDIBELL), Barcelona, Spain.
Universidad del Norte · COInstituto de Salud Carlos III · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundImplementation of sputum Gram stain in the initial assessment of community-acquired pneumonia (CAP) patients is still controversial. We performed a systematic review and meta-analysis to investigate the usefulness of sputum Gram stain for defining the etiologic diagnosis of CAP in adult patients.

methodsWe systematically searched the Medline, Embase, Science Direct, Scopus and LILACS databases for full-text articles. Relevant studies were reviewed by at least three investigators who extracted the data, pooled them using a random effects model, and carried out quality assessment. For each bacterium (Streptococcus pneumoniae, Haemophilus influenzae, Staphylococcus aureus, and Gram-negative bacilli), pooled sensitivity, specificity, positive and negative likelihood ratios were reported.

resultsAfter a review of 3539 abstracts, 20 articles were included in the present meta-analysis. The studies included yielded 5619 patients with CAP. Pooled sensitivity and pooled specificity of sputum Gram stain were 0.59 (95% CI, 0.56-0.62) and 0.87 (95% CI, 0.86-0.89) respectively for S. pneumoniae, 0.78 (95% CI, 0.72-0.84) and 0.96 (95% CI, 0.94-0.97) for H. influenzae, 0.72 (95% CI, 0.53-0.87) and 0.97 (95% CI, 0.95-0.99) for S. aureus, and 0.64 (95% CI, 0.49-0.77) and 0.99 (95% CI, 0.97-0.99) for Gram-negative bacilli.

conclusionSputum Gram stain test is sensitive and highly specific for identifying the main causative pathogens in adult patients with CAP.

trial registrationThis study has been registered at PROSPERO International prospective register of systematic reviews under registration no. CRD42015015337 .

Indexed as

Gentian VioletPhenazinesStaining and LabelingBacteriaCommunity-Acquired InfectionsHaemophilus influenzaeHumansPneumoniaSputumStaphylococcus aureusStreptococcus pneumoniaeGentian VioletGram's stainPhenazinesCommunity-acquired pneumoniaGramMeta-analysisSensitivitySpecificitySputum

Identifiers

PMID31077143
PMCPMC6509769
OpenAlexW2944080153

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.