Evidence map›Paper›PMID 31076625›Full record

ArticleScientific reports2019

Identification of spore-forming bacteria isolated from contaminated Lowenstein Jensen media and effectiveness of Vancomycin to reduce Mycobacterial culture contamination in Burkina-Faso.

Antoinette Kaboré, Juliette Tranchot-Diallo, Hervé Hien, Ousséni Zouré, Dezémon Zingué, Adama Sanou, Michel Kireopori Gomgnimbou, Géraldine Daneau, Georges Anicet Ouédraogo, Nicolas Méda and 1 more

Abstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Antoinette KaboréDépartement des Sciences Biomédicales, Centre MURAZ, Bobo- Dioulasso, Burkina Faso. aswkabore@yahoo.fr.
Juliette Tranchot-DialloDépartement des Sciences Biomédicales, Centre MURAZ, Bobo- Dioulasso, Burkina Faso.
Hervé HienDépartement de Santé Publique, Centre MURAZ, Bobo-Dioulasso, Burkina Faso.
Ousséni ZouréDépartement des Sciences Biomédicales, Centre MURAZ, Bobo- Dioulasso, Burkina Faso.
Dezémon ZinguéDépartement des Sciences Biomédicales, Centre MURAZ, Bobo- Dioulasso, Burkina Faso.ORCID http://orcid.org/0000-0003-0438-1894
Adama SanouDépartement des Sciences Biomédicales, Centre MURAZ, Bobo- Dioulasso, Burkina Faso.
Michel Kireopori GomgnimbouDépartement des Sciences Biomédicales, Centre MURAZ, Bobo- Dioulasso, Burkina Faso.
Géraldine DaneauSciensano, Bruxelles, Belgium.
Georges Anicet OuédraogoUFR/ST, Université Nazi BONI, Bobo-Dioulasso, Burkina Faso.
Nicolas MédaDépartement de Santé Publique, Centre MURAZ, Bobo-Dioulasso, Burkina Faso.
Lassana SangaréDépartement de Bactériologie-Virologie, CHU Yalgado OUEDRAOGO, Ouagadougou, Burkina Faso.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The type of commensal microorganisms can influence the efficiency of sputum decontamination for TB diagnosis. A basic characterization of contaminants from LJ contaminated media showed that Gram positive Spore Forming Bacteria (SFB) were the major contaminants. This study aims to identify the species of this contaminants and to evaluate the effectiveness of VCNT at 10 µg of vancomycin to reduce mycobacterial culture contamination mainly linked to SFB. Fifty-three SFB isolated between February 2016 and May 2017 were used. The effectiveness of LJ with VCNT at 10 µg of Vancomycin were evaluated with sputum collected in the same period. SFB had been stored at -20 °C and identified after subculture onto 5% sheep blood Columbia agar and incubated at 37 °C during 24 h. Bacteria cells and isolated colonies were described. API 50CH/B was performed and MALDI-TOF MS was used for external quality control. Thirty- five (66%) isolates representing 4 genera (Bacillus, Paenibacillus, Brevisbacillus and Lysinibacillus) including 10 species were identified. The most important species were Bacillus cereus (30%) and Bacillus licheniformis (21%). Eighteen (34%) isolates were non-reactive Bacillus. The overall contamination rate on LJ with VCNT at 10 µg of vancomycin was statistically lower than which without VCNT (18.7% versus 43.8%) (p = 0.01). The most important SFB identified were B. cereus and B. licheniformis. Almost all identified strains were similar to those currently isolated in fermented traditional food suggesting in part food related contaminants. VCNT containing 10 µg of vancomycin is a good alternative method to reduce mycobacterial culture contamination.

Indexed as

Bacteriological TechniquesBurkina FasoColistinCulture MediaGram-Positive BacteriaMycobacteriumNystatinSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationSpores, BacterialSputumSymbiosisTrimethoprimVancomycinColistinCulture MediaNystatinTrimethoprimVancomycin

Identifiers

PMID31076625
PMCPMC6510733

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.