Evidence map›Paper›PMID 31075491›Full record

ArticleBiochimica et biophysica acta. Molecular basis of disease2019

Missense variant in TPI1 (Arg189Gln) causes neurologic deficits through structural changes in the triosephosphate isomerase catalytic site and reduced enzyme levels in vivo.

Bartholomew P Roland, Kristen R Richards, Stacy L Hrizo, Samantha Eicher, Zackery J Barile, Tien-Chien Chang, Grace Savon, Paola Bianchi, Elisa Fermo, Bianca Maria Ricerca and 4 more

Open access · greenAbstract readCase Reports
In one paragraph

Article in Biochimica et biophysica acta. Molecular basis of disease, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 21 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. LncRNA-Mediated TPI1 and PKM2 Promote Self-Renewal and Chemoresistance in GBM.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  5. Article
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  7. Three-dimensional-engineered bioprintedBioactive materials · 2022
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Bartholomew P RolandDepartment of Pharmacology & Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA; Pittsburgh Institute for Neurodegenerative Diseases (PIND), University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA; Department of Pharmacology, Vanderbilt University, Nashville, TN 37232, USA.
Kristen R RichardsBiological Sciences and Structural Biology, University of Pittsburgh, Pittsburgh, PA 15260, USA.
Stacy L HrizoDepartment of Pharmacology & Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA; Pittsburgh Institute for Neurodegenerative Diseases (PIND), University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA; Department of Biology, Slippery Rock University, Slippery Rock, PA 16057, USA.
Samantha EicherDepartment of Pharmacology & Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA; Pittsburgh Institute for Neurodegenerative Diseases (PIND), University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.
Zackery J BarileDepartment of Pharmacology & Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA; Pittsburgh Institute for Neurodegenerative Diseases (PIND), University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.
Tien-Chien ChangDepartment of Pharmacology & Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA; Pittsburgh Institute for Neurodegenerative Diseases (PIND), University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.
Grace SavonDepartment of Pharmacology & Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA; Pittsburgh Institute for Neurodegenerative Diseases (PIND), University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA.
Paola BianchiFondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico, UOC Ematologia, UOS Fisiopatologia delle Anemie, Via F Sforza, 35, 20122 Milan, Italy.
Elisa FermoFondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico, UOC Ematologia, UOS Fisiopatologia delle Anemie, Via F Sforza, 35, 20122 Milan, Italy.
Bianca Maria RicercaHematology Institute, Universitary Hospital A. Gemelli, Largo A. Gemelli 8, 00168 Rome, Italy.
Luca TortoroloPediatric Intensive Care Unit, Universitary Hospital A. Gemelli, Largo A. Gemelli 8, 00168 Rome, Italy.
Jerry VockleyDepartment of Pediatrics and Human Genetics, University of Pittsburgh Schools of Medicine and Public health, Pittsburgh, PA 15261, USA.
Andrew P VanDemarkBiological Sciences and Structural Biology, University of Pittsburgh, Pittsburgh, PA 15260, USA. Electronic address: andyv@pitt.edu.
Michael J PalladinoDepartment of Pharmacology & Chemical Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA; Pittsburgh Institute for Neurodegenerative Diseases (PIND), University of Pittsburgh School of Medicine, Pittsburgh, PA 15261, USA. Electronic address: mjp44@pitt.edu.
University of Pittsburgh · USAgostino Gemelli University Polyclinic · ITFondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico · ITSlippery Rock University · US

Funding

PREDOCTORAL TRAINING IN PHARMACOLOGICAL SCIENCEST32GM008424 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PAGANO, PATRICK J · 1994 to 2019
$3.4M
Protein quality control mechanisms of novel soluble substratesR01GM103369 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PALLADINO, MICHAEL JOHN · 2012 to 2015
$1.2M
Pre-clinical studies of novel mitochondrial gene therapiesR01GM108073 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PALLADINO, MICHAEL JOHN · 2015 to 2018
$1.1M
Regulators of cytosolic protein quality control in aging and diseaseR21AG059385 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PALLADINO, MICHAEL JOHN · 2018 to 2019
$443k
Genetic modulation of mitochondrial functionR21AG059386 · NIA · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PALLADINO, MICHAEL JOHN · 2018 to 2019
$430k
Determining the cellular and molecular basis of mitochondrial encephalomyopathy seizuresR21NS095614 · NINDS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PALLADINO, MICHAEL JOHN · 2015 to 2016
$424k
NIA NIH HHS R21 AG059385NIA NIH HHS R21 AG059386NIGMS NIH HHS R01 GM103369NIGMS NIH HHS R01 GM108073NIGMS NIH HHS T32 GM008424NINDS NIH HHS R21 NS095614
6 · The paper itself

Abstract

Mutations in the gene triosephosphate isomerase (TPI) lead to a severe multisystem condition that is characterized by hemolytic anemia, a weakened immune system, and significant neurologic symptoms such as seizures, distal neuropathy, and intellectual disability. No effective therapy is available. Here we report a compound heterozygous patient with a novel TPI pathogenic variant (NM_000365.5:c.569G>A:p.(Arg189Gln)) in combination with the common (NM_000365.5:c.315G>C:p.(Glu104Asp)) allele. We characterized the novel variant by mutating the homologous Arg in Drosophila using a genomic engineering system, demonstrating that missense mutations at this position cause a strong loss of function. Compound heterozygote animals were generated and exhibit motor behavioural deficits and markedly reduced protein levels. Furthermore, examinations of the TPI

Indexed as

AllelesAmino Acid SequenceAnemia, Hemolytic, Congenital NonspherocyticAnimalsBase SequenceCarbohydrate Metabolism, Inborn ErrorsCatalytic DomainChild, PreschoolDimerizationDisease Models, AnimalDrosophilaDrosophila ProteinsFemaleFibroblastsHumansMutation, MissenseDrosophila ProteinsTriose-Phosphate IsomeraseGenomic engineeringGlycolytic enzymopathyTPI deficiencyTriosephosphate isomerase

Identifiers

PMID31075491
PMCPMC6659405
OpenAlexW2944273034

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.