Evidence map›Paper›PMID 31075257›Full record

ArticleExperimental cell research2019

Quantitative assessment of changes in cell growth, size and morphology during telomere-initiated cellular senescence in Saccharomyces cerevisiae.

Neda Z Ghanem, Shubha R L Malla, Naoko Araki, L Kevin Lewis

Open access · bronzeAbstract read
In one paragraph

Article in Experimental cell research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
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  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Neda Z GhanemDepartment of Chemistry and Biochemistry, Texas State University, San Marcos, TX, 78666, USA.
Shubha R L MallaDepartment of Chemistry and Biochemistry, Texas State University, San Marcos, TX, 78666, USA.
Naoko ArakiDepartment of Chemistry and Biochemistry, Texas State University, San Marcos, TX, 78666, USA.
L Kevin LewisDepartment of Chemistry and Biochemistry, Texas State University, San Marcos, TX, 78666, USA. Electronic address: LL18@txstate.edu.
Texas State University · US

Funding

Mechanism of in-vitro agingR15AG028520 · NIA · TEXAS STATE UNIVERSITY · PI LEWIS, LYSLE KEVIN · 2007 to 2007
$179k
NIA NIH HHS R15 AG028520
6 · The paper itself

Abstract

Telomerase-deficient cells of the budding yeast S. cerevisiae experience progressive telomere shortening and undergo senescence in a manner similar to that seen in cultured human fibroblasts. The cells exhibit a DNA damage checkpoint-like stress response, undergo changes in size and morphology, and eventually stop dividing. In this study, a new assay is described that allowed quantitation of senescence in telomerase-deficient est2 cells with applied statistics. Use of the new technique revealed that senescence was strongly accelerated in est2 mutants that had homologous recombination genes RAD51, RAD52 or RAD54 co-inactivated, but was only modestly affected when RAD55, RAD57 or RAD59 were knocked out. Additionally, a new approach for calculating population doublings indicated that loss of growth capacity occurred after approximately 64 generations in est2 cells but only 42 generations in est2 rad52 cells. Phase contrast microscopy experiments demonstrated that senescing est2 cells became enlarged in a time-dependent manner, ultimately exhibiting a 60% increase in cell size. Progressive alterations in physical properties were also observed, including striking changes in light scattering characteristics and cellular sedimentation rates. The results described herein will facilitate future studies of genetic and environmental factors that affect telomere shortening-associated cell senescence rates using the yeast model system.

Indexed as

Cell ProliferationCell SizeCellular SenescenceMicrobiological TechniquesGene Knockout TechniquesModels, BiologicalSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTelomeraseTelomereTelomere ShorteningEST2 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsTelomeraseAgingCheckpointHomologous recombinationSenescenceTelomerase

Identifiers

PMID31075257
PMCPMC6563841
OpenAlexW2944203428

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.