Evidence map›Paper›PMID 31073789›Full record

ArticleJournal of biological physics2019

Active fluid with Acidithiobacillus ferrooxidans: correlations between swimming and the oxidation route.

Juan D Torrenegra, Liliam C Agudelo-Morimitsu, Marco A Márquez-Godoy, Juan P Hernández-Ortiz

Open access · bronzeAbstract read
In one paragraph

Article in Journal of biological physics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 96% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Simplification of theACS omega · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Juan D TorrenegraDepartamento de Materiales y Minerales, Universidad Nacional de Colombia, Sede Medellín, Calle 75 # 79A-51, Bloque M17, Faculty of Mines, Medellín, Colombia, 050034.
Liliam C Agudelo-MorimitsuDepartamento de Materiales y Minerales, Universidad Nacional de Colombia, Sede Medellín, Calle 75 # 79A-51, Bloque M17, Faculty of Mines, Medellín, Colombia, 050034.
Marco A Márquez-GodoyDepartamento de Materiales y Minerales, Universidad Nacional de Colombia, Sede Medellín, Calle 75 # 79A-51, Bloque M17, Faculty of Mines, Medellín, Colombia, 050034.
Juan P Hernández-OrtizDepartamento de Materiales y Minerales, Universidad Nacional de Colombia, Sede Medellín, Calle 75 # 79A-51, Bloque M17, Faculty of Mines, Medellín, Colombia, 050034. jphernandezo@unal.edu.co.ORCID 0000-0003-0404-9947
Universidad Nacional de Colombia · COUniversity of Wisconsin–Madison · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To explore engineering platforms towards 'active bacterial baths', we grow and characterize native and commercial strains of Acidithiobacillus ferrooxidans to promote swimming locomotion. Three different energy sources were used, namely elemental sulfur, ferrous sulfate, and pyrite. The characteristics of the culture, such as pH, Eh, and the concentration of cells and ions, are monitored to seek correlations between the oxidation route and the transport mechanism. We found that only elemental sulfur induces swimming mobility in the commercial DSMZ - 24,419 strain, while ferrous sulfate and the sulfide mineral, pyrite, did not activate swimming on any strain. The bacterial mean squared displacement and the mean velocity are measured to provide a quantitative description of the bacterial mobility. We found that, even if the A. ferrooxidans strain is grown in a sulfur-rich environment, it preferentially oxidizes iron when an iron-based material is included in the media. Similar to other species, once the culture pH decreases below 1.2, the active locomotion is inhibited. The engineering control and activation of swimming in bacterial cultures offer fertile grounds towards applications of active suspensions such as energy-efficient bioleaching, mixing, drug delivery, and bio-sensing.

Indexed as

HydrodynamicsMovementAcidithiobacillusCulture TechniquesEnergy MetabolismOxidation-ReductionSwimmingAcidithiobacillus ferrooxidansActive fluidBacterial mobilityMean squared displacement

Identifiers

PMID31073789
PMCPMC6548800
OpenAlexW2944236397

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.