Evidence map›Paper›PMID 31072347›Full record

ArticleBMC plant biology2019

Transcriptome and physiological analyses for revealing genes involved in wheat response to endoplasmic reticulum stress.

Xing Yu, Tanchun Wang, Meichen Zhu, Liting Zhang, Fengzhi Zhang, Enen Jing, Yongzhe Ren, Zhiqiang Wang, Zeyu Xin, Tongbao Lin

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 45 citations in OpenAlex.

  1. Engineering of plant-derived P450scc forSynthetic and systems biotechnology · 2026
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  3. A novel natural variation in the promoter of TaDHN4D1 confers salt tolerance in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025
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  16. Seed-BorneFrontiers in microbiology · 2022
    Article
  17. Article
  18. Salt stress proteins in plants: An overview.Frontiers in plant science · 2022
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Xing YuCollege of Agronomy, Henan Agricultural University, Zhengzhou, China.
Tanchun WangDepartment of Basic Biomedical Sciences, Touro College of Osteopathic Medicine - Middletown, NY, USA.
Meichen ZhuCollege of Agronomy, Henan Agricultural University, Zhengzhou, China.
Liting ZhangCollege of Agronomy, Henan Agricultural University, Zhengzhou, China.
Fengzhi ZhangCollege of Agronomy, Henan Agricultural University, Zhengzhou, China.
Enen JingCollege of Agronomy, Henan Agricultural University, Zhengzhou, China.
Yongzhe RenCollege of Agronomy, Henan Agricultural University, Zhengzhou, China.
Zhiqiang WangCollege of Agronomy, Henan Agricultural University, Zhengzhou, China.
Zeyu XinCollege of Agronomy, Henan Agricultural University, Zhengzhou, China. mrxxtz@163.com.
Tongbao LinCollege of Agronomy, Henan Agricultural University, Zhengzhou, China. lintongbao@126.com.
Henan Agricultural University · CNNational Engineering Research Center for Wheat · CNTouro College · US

Funding

National Key Research and Development Program of China 2016YFD0300205State Key Laboratory of Wheat and Maize Crop Science Projects 39990011, 39990051
6 · The paper itself

Abstract

backgroundWheat production is largely restricted by adverse environmental stresses. Under many undesirable conditions, endoplasmic reticulum (ER) stress can be induced. However, the physiological and molecular responses of wheat to ER stress remain poorly understood. We used dithiothreitol (DTT) and tauroursodeoxycholic acid (TUDCA) to induce or suppress ER stress in wheat cells, respectively, with the aim to reveal the molecular background of ER stress responses using a combined approach of transcriptional profiling and morpho-physiological characterization.

methodsTo understand the mechanism of wheat response to ER stress, three wheat cultivars were used in our pre-experiments. Among them, the cultivar with a moderate stress tolerance, Yunong211 was used in the following experiments. We used DTT (7.5 mM) to induce ER stress and TUDCA (25 μg·mL

resultsMorpho-physiological results showed DTT significantly reduced plant height and biomass, decreased contents of chlorophyll and water, increased electrolyte leakage rate and antioxidant enzymes activity, and accelerated the cell death ratio, whereas these changes were all remarkably alleviated after TUDCA co-treatment. Therefore, RNA sequencing was performed to determine the genes involved in regulating wheat response to stress. Transcriptomic analysis revealed that 8204 genes were differentially expressed in three treatment groups. Among these genes, 158 photosynthesis-related genes, 42 antioxidant enzyme genes, 318 plant hormone-related genes and 457 transcription factors (TFs) may play vital roles in regulating wheat response to ER stress. Based on the comprehensive analysis, we propose a hypothetical model to elucidate possible mechanisms of how plants adapt to environmental stresses.

conclusionsWe identified several important genes that may play vital roles in wheat responding to ER stress. This work should lay the foundations of future studies in plant response to environmental stresses.

Indexed as

Gene Expression Regulation, PlantGenes, PlantDithiothreitolEndoplasmic Reticulum StressGene Expression ProfilingGene OntologyPlant LeavesPlant RootsReproducibility of ResultsSequence Analysis, RNATaurochenodeoxycholic AcidTranscription FactorsTranscriptomeTriticumDithiothreitolTaurochenodeoxycholic AcidTranscription FactorsursodoxicoltaurineAntioxidant enzymesChlorophyllDTTRNA-seqTranscription factorsTUDCA

Identifiers

PMID31072347
PMCPMC6509841
OpenAlexW2947535070

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.