Evidence map›Paper›PMID 31071215›Full record

ArticleJournal of experimental botany2019

Evolutionary comparison of competitive protein-complex formation of MYB, bHLH, and WDR proteins in plants.

Bipei Zhang, Divykriti Chopra, Andrea Schrader, Martin Hülskamp

Open access · hybridAbstract read
In one paragraph

Article in Journal of experimental botany, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 77 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Review
  16. Identification and Functional Characterization ofInternational journal of molecular sciences · 2023
    Article
  17. Genome-Wide Investigation and Functional Analysis Reveal ThatInternational journal of molecular sciences · 2023
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Bipei ZhangBotanical Institute, Biocenter, Cologne University, Cologne, Germany.
Divykriti ChopraBotanical Institute, Biocenter, Cologne University, Cologne, Germany.
Andrea SchraderBotanical Institute, Biocenter, Cologne University, Cologne, Germany.
Martin HülskampBotanical Institute, Biocenter, Cologne University, Cologne, Germany.
University of Cologne · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A protein complex consisting of a MYB, basic Helix-Loop-Helix, and a WDR protein, the MBW complex, regulates five traits, namely the production of anthocyanidin, proanthocyanidin, and seed-coat mucilage, and the development of trichomes and root hairs. For complexes involved in trichome and root hair development it has been shown that the interaction of two MBW proteins can be counteracted by the respective third protein (called competitive complex formation). We examined competitive complex formation for selected MBW proteins from Arabidopsis thaliana, Arabis alpina, Gossypium hirsutum, Petunia hybrida, and Zea mays. Quantitative analyses of the competitive binding of MYBs and WDRs to bHLHs were done by pull-down assays using ProtA- and luciferase-tagged proteins expressed in human HEC cells. We found that some bHLHs show competitive complex formation whilst others do not. Competitive complex formation strongly correlated with a phylogenetic tree constructed with the bHLH proteins under investigation, suggesting a functional relevance. We demonstrate that this different behavior can be explained by changes in one amino acid and that this position is functionally relevant in trichome development but not in anthocyanidin regulation.

Indexed as

Evolution, MolecularArabidopsisArabisBasic Helix-Loop-Helix ProteinsCarrier ProteinsGossypiumMagnoliopsidaPetuniaPlant ProteinsTranscription FactorsZea maysBasic Helix-Loop-Helix ProteinsCarrier ProteinsPlant ProteinsTranscription FactorsArabidopsis thalianaArabis alpinacompetitive complex formationevolutionGossypium hirsutumMBW complexPetunia hybridaZea mays

Identifiers

PMID31071215
PMCPMC6598095
OpenAlexW2938946103

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.