Evidence map›Paper›PMID 31070637›Full record

ArticleMetallomics : integrated biometal science2019

Single nucleotide polymorphisms in the human ATP7B gene modify the properties of the ATP7B protein.

Courtney J McCann, Samuel Jayakanthan, Mariacristina Siotto, Nan Yang, Maria Osipova, Rosanna Squitti, Svetlana Lutsenko

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Metallomics : integrated biometal science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. [Progress in molecular mechanism of hepatolenticular degeneration induced by ATP7B gene mutation].Zhonghua gan zang bing za zhi = Zhonghua ganzangbing zazhi = Chinese journal of hepatology · 2020
    Review
  10. A case of a mild Wolfram Syndrome with concomitantCellR4-- repair, replacement, regeneration, & reprogramming · 2019
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Courtney J McCannDepartment of Physiology, Johns Hopkins University, Baltimore, MD, USA. Lutsenko@jhmi.edu.
Samuel Jayakanthan
Mariacristina Siotto
Nan Yang
Maria Osipova
Rosanna Squitti
Svetlana Lutsenko
Johns Hopkins University · USDon Carlo Gnocchi Foundation · ITIstituti di Ricovero e Cura a Carattere Scientifico · IT

Funding

Molecular Mechanisms of ATP-dependent Copper TransportersR01DK071865 · NIDDK · OREGON HEALTH & SCIENCE UNIVERSITY · PI SVETLANA LUTSENKO · 2005 to 2026
$7.9M
Molecular Mechanisms of ATP-Dependent Copper TransportersR56DK071865 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI LUTSENKO, SVETLANA · 2018 to 2018
$539k
NIDDK NIH HHS R01 DK071865NIDDK NIH HHS R56 DK071865
6 · The paper itself

Abstract

Single nucleotide polymorphisms (SNPs) are the largest source of sequence variation in the human genome. However, their functional significance is not well understood. We show that SNPs in the Wilson disease gene, ATP7B, that produce amino-acid substitutions K832R and R952K, modulate ATP7B properties in vitro and influence serum copper (Cu) status in vivo. The presence of R832 is associated with a lower ATP7B abundance and a diminished trafficking in response to elevated Cu. The K832R substitution alters surface exposure of amino acid residues in the actuator domain and increases its conformational flexibility. All SNP-related ATP7B variants (R832/R952, R832/K952, K832/K952, and K832/R952) have Cu-transport activity. However, the activity of ATP7B-K832/K952 is lower compared to other variants. In humans, the presence of K952 is associated with a higher fraction of exchangeable Cu in serum. Thus, SNPs may modulate the properties of ATP7B and the organism Cu status.

Indexed as

Polymorphism, Single NucleotideAmino Acid SequenceAmino Acid SubstitutionCopperCopper-Transporting ATPasesHEK293 CellsHepatolenticular DegenerationHumansMolecular Dynamics SimulationProtein ConformationProtein TransportATP7B protein, humanCopperCopper-Transporting ATPases

Identifiers

PMID31070637
PMCPMC6878656
OpenAlexW2944147295

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.