Evidence map›Paper›PMID 31070104›Full record

SynthesisJournal of the American Heart Association2019

Genetic Determinants of Circulating Glycine Levels and Risk of Coronary Artery Disease.

Qiong Jia, Yi Han, Pin Huang, Nicholas C Woodward, Janet Gukasyan, Johannes Kettunen, Mika Ala-Korpela, Olga Anufrieva, Qin Wang, Markus Perola and 13 more

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in Journal of the American Heart Association, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 3 pooled it
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 3 syntheses or guidelines pooled it, 27 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
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  10. The Physiological and Pathological Role of Acyl-CoA Oxidation.International journal of molecular sciences · 2023
    Review
  11. Article
  12. Article
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  14. Review
  15. Article
  16. Article
  17. Article
  18. The association of genetically determined serum glycine with cardiovascular risk in East Asians.Nutrition, metabolism, and cardiovascular diseases : NMCD · 2021
    Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

23 authors at 14 institutions in 6 countries.

Qiong Jia1 Department of Preventive Medicine Keck School of Medicine, University of Southern California Los Angeles CA.
Yi Han1 Department of Preventive Medicine Keck School of Medicine, University of Southern California Los Angeles CA.
Pin Huang1 Department of Preventive Medicine Keck School of Medicine, University of Southern California Los Angeles CA.
Nicholas C Woodward1 Department of Preventive Medicine Keck School of Medicine, University of Southern California Los Angeles CA.
Janet Gukasyan1 Department of Preventive Medicine Keck School of Medicine, University of Southern California Los Angeles CA.
Johannes Kettunen4 Computational Medicine Faculty of Medicine University of Oulu and Biocenter Oulu Oulu Finland.
Mika Ala-Korpela4 Computational Medicine Faculty of Medicine University of Oulu and Biocenter Oulu Oulu Finland.
Olga Anufrieva4 Computational Medicine Faculty of Medicine University of Oulu and Biocenter Oulu Oulu Finland.
Qin Wang4 Computational Medicine Faculty of Medicine University of Oulu and Biocenter Oulu Oulu Finland.
Markus Perola5 National Institute for Health and Welfare Helsinki Finland.
Olli Raitakari14 Research Centre of Applied and Preventive Cardiovascular Medicine University of Turku Finland.
Terho Lehtimäki18 Department of Clinical Chemistry Fimlab Laboratories and Faculty of Medicine and Health Technology Finnish Cardiovascular Research Center-Tampere Tampere University Tampere Finland.
Jorma Viikari15 Department of Medicine University of Turku Finland.
Marjo-Riitta Järvelin4 Computational Medicine Faculty of Medicine University of Oulu and Biocenter Oulu Oulu Finland.
Michael Boehnke22 Department of Biostatistics and Center for Statistical Genetics University of Michigan Ann Arbor MI.
Markku Laakso8 School of Medicine University of Eastern Finland Kuopio Finland.
Karen L Mohlke23 Department of Genetics University of North Carolina Chapel Hill NC.
Oliver Fiehn24 Genome Center University of California Davis CA.
Zeneng Wang25 Department of Cardiovascular Medicine Cleveland Clinic Cleveland OH.
W H Wilson Tang25 Department of Cardiovascular Medicine Cleveland Clinic Cleveland OH.
Stanley L Hazen24 Genome Center University of California Davis CA.
Jaana A Hartiala1 Department of Preventive Medicine Keck School of Medicine, University of Southern California Los Angeles CA.
Hooman Allayee1 Department of Preventive Medicine Keck School of Medicine, University of Southern California Los Angeles CA.
University of Southern California · USCleveland Clinic · USTurku University Hospital · FIUniversity of California, Davis · USUniversity of Oulu · FIBaker Heart and Diabetes Institute · AUFimlab (Finland) · FIFinnish Institute for Health and Welfare · FIMedical Research Council · GBUniversity of Eastern Finland · FIUniversity of Helsinki · FIUniversity of Michigan–Ann Arbor · USUniversity of North Carolina at Chapel Hill · USWoodward (United States) · US

Funding

Southern California Clinical and Translational Science InstituteUL1TR001855 · NCATS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Thomas A Buchanan, Michele D. Kipke · 2016 to 2026
$81.3M
Structural Determinants Of Ceruloplasmin Inflammatory ActivityP01HL076491 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI PLOW, EDWARD FRANKLIN · 2004 to 2019
$27.3M
Regional Pilot And Feasibility Study Grants ProgramP30DK020572 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Martin G Myers · 2013 to 2026
$24.3M
Regression of Atherosclerosis CoreP01HL098055 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI FISHER, EDWARD A · 2010 to 2014
$12.1M
Identifying Genes for Type 2 Diabetes: FUSIONU01DK062370 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BOEHNKE, MICHAEL L, SCOTT, LAURA J. · 2009 to 2021
$11.6M
Targeted Genetic Analysis of T2D and Quantitative TraitsR01DK072193 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KAREN L. MOHLKE · 2005 to 2026
$11.3M
Gut Flora Metabolism of Dietary Phosphatidylcholine and CVDR01HL103866 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI HAZEN, STANLEY L · 2010 to 2023
$10.8M
Genetic epidemiology of rare and regulatory variants for metabolic traitsR01DK093757 · NIDDK · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KAREN L. MOHLKE · 2011 to 2026
$8.2M
Identifying Genes for Type 2 Diabetes:FUSIONR01DK062370 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BOEHNKE, MICHAEL L, SCOTT, LAURA J. · 2003 to 2025
$6.7M
Functional Cardio-MetabolomicsP20HL113452 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI HAZEN, STANLEY L, TANG, WAI HONG WILSON · 2012 to 2016
$4.8M
Southern California Children's Environmental Health Center (SC-CEHC)P01ES022845 · NIEHS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI MCCONNELL, ROB S · 2013 to 2018
$4.0M
INTEGRATIVE GENETIC APPROACHES TO GENE-AIR POLLUTION INTERACTIONS IN ASTHMAR01ES021801 · NIEHS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI AKBARI, OMID, ALLAYEE, HOOMAN · 2012 to 2016
$3.9M
Medical Research Council MC_UU_12013/1NCATS NIH HHS UL1 TR001855NHLBI NIH HHS P01 HL076491NHLBI NIH HHS P01 HL098055NHLBI NIH HHS P20 HL113452NHLBI NIH HHS R01 HL103866NHLBI NIH HHS R01 HL103931NHLBI NIH HHS R01 HL133169NIDDK NIH HHS P30 DK020572NIDDK NIH HHS R01 DK062370NIDDK NIH HHS R01 DK072193NIDDK NIH HHS R01 DK093757NIDDK NIH HHS U01 DK062370NIEHS NIH HHS P01 ES022845NIEHS NIH HHS R01 ES021801NIEHS NIH HHS R01 ES025786NIH HHS S10 OD016346
6 · The paper itself

Abstract

Background Recent studies have revealed sexually dimorphic associations between the carbamoyl-phosphate synthase 1 locus, intermediates of the metabolic pathway leading from choline to urea, and risk of coronary artery disease ( CAD ) in women. Based on evidence from the literature, the atheroprotective association with carbamoyl-phosphate synthase 1 could be mediated by the strong genetic effect of this locus on increased circulating glycine levels. Methods and Results We sought to identify additional genetic determinants of circulating glycine levels by carrying out a meta-analysis of genome-wide association study data in up to 30 118 subjects of European ancestry. Mendelian randomization and other analytical approaches were used to determine whether glycine-associated variants were associated with CAD and traditional risk factors. Twelve loci were significantly associated with circulating glycine levels, 7 of which were not previously known to be involved in glycine metabolism ( ACADM , PHGDH , COX 18- ADAMTS 3, PSPH , TRIB 1, PTPRD , and ABO ). Glycine-raising alleles at several loci individually exhibited directionally consistent associations with decreased risk of CAD . However, these effects could not be attributed directly to glycine because of associations with other CAD -related traits. By comparison, genetic models that only included the 2 variants directly involved in glycine degradation and for which there were no other pleiotropic associations were not associated with risk of CAD or blood pressure, lipid levels, and obesity-related traits. Conclusions These results provide additional insight into the genetic architecture of glycine metabolism, but do not yield conclusive evidence for a causal relationship between circulating levels of this amino acid and risk of CAD in humans.

Indexed as

Genetic LociPolymorphism, Single NucleotideBiomarkersCoronary Artery DiseaseFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyGlycineHumansMaleMendelian Randomization AnalysisPhenotypeRisk AssessmentRisk FactorsBiomarkersGlycinecausalitycoronary artery diseasegenome‐wide association studyglycineMendelian randomizationmeta‐analysis

Identifiers

PMID31070104
PMCPMC6585317
OpenAlexW2944006800

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.