Evidence map›Paper›PMID 31069963›Full record

ArticleMicrobiologyOpen2019

The small subunit of DNA polymerase D (DP1) associates with GINS-GAN complex of the thermophilic archaea in Thermococcus sp. 4557.

Shuhong Lu, Xuesong Zhang, Kaiying Chen, Zimeng Chen, Yixiang Li, Zhongquan Qi, Yulong Shen, Zhuo Li

Open access · goldAbstract read
In one paragraph

Article in MicrobiologyOpen, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.3field-weighted citation impact, top 44% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Shuhong LuCollege of Ocean and Earth Sciences, Xiamen University, Xiamen, Fujian, China.
Xuesong ZhangThird Institute of Oceanography, Ministry of Natural Resources of China, Xiamen, Fujian, China.
Kaiying ChenThird Institute of Oceanography, Ministry of Natural Resources of China, Xiamen, Fujian, China.
Zimeng ChenThird Institute of Oceanography, Ministry of Natural Resources of China, Xiamen, Fujian, China.
Yixiang LiSchool of Medicine, Guangxi University, Nanning, Guangxi, China.
Zhongquan QiSchool of Medicine, Guangxi University, Nanning, Guangxi, China.
Yulong ShenState Key Laboratory of Microbial Technology, Shandong University, Qingdao, Shandong, China.
Zhuo LiThird Institute of Oceanography, Ministry of Natural Resources of China, Xiamen, Fujian, China.ORCID 0000-0003-3453-5903
Ministry of Natural Resources · CNGuangxi University · CNShandong University · CNXiamen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The eukaryotic GINS, Cdc45, and minichromosome maintenance proteins form an essential complex that moves with the DNA replication fork. The GINS protein complex has also been reported to associate with DNA polymerase. In archaea, the third domain of life, DNA polymerase D (PolD) is essential for DNA replication, and the genes encoding PolDs exist only in the genomes of archaea. The archaeal GAN (GINS-associated nuclease) is believed to be a homolog of the eukaryotic Cdc45. In this study, we found that the Thermococcus sp. 4557 DP1 (small subunit of PolD) interacted with GINS15 in vitro, and the 3'-5' exonuclease activity of DP1 was inhibited by GINS15. We also demonstrated that the GAN, GINS15, and DP1 proteins interact to form a complex adapting a GAN-GINS15-DP1 order. The results of this study imply that the complex constitutes a core of the DNA replisome in archaea.

Indexed as

Protein Interaction MapsProtein MultimerizationArchaeal ProteinsDNA ReplicationThermococcusTranscription Factor DP1Archaeal ProteinsTranscription Factor DP1archaeaDNA replicationGANGINSPolD

Identifiers

PMID31069963
PMCPMC6741145
OpenAlexW2944794624

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.