Evidence map›Paper›PMID 31069893›Full record

ArticleCancer science2019

Long noncoding RNA actin filament-associated protein 1 antisense RNA 1 promotes malignant phenotype through binding with lysine-specific demethylase 1 and repressing HMG box-containing protein 1 in non-small-cell lung cancer.

Shanxun Yu, Daolu Yang, Yunyao Ye, Pei Liu, Zhenyao Chen, Tianyao Lei, Jiaze Pu, Longfa Liu, Zhaoxia Wang

Open access · goldAbstract read
In one paragraph

Article in Cancer science, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 2 pooled it
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 2 syntheses or guidelines pooled it, 28 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Review
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  7. Article
  8. Review
  9. A novel autophagy-related lncRNA survival model for lung adenocarcinoma.Journal of cellular and molecular medicine · 2021
    Article
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  13. Observational
  14. LncRNAOncoTargets and therapy · 2020
    Article
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Shanxun YuDepartment of Oncology, The Second Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Daolu YangDepartment of Oncology, The Second Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Yunyao YeDepartment of Oncology, The Second Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Pei LiuDepartment of Oncology, The Second Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Zhenyao ChenDepartment of Oncology, The Second Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Tianyao LeiDepartment of Oncology, The Second Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Jiaze PuDepartment of Digestive Oncology, The Fourth Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Longfa LiuDepartment of Digestive Oncology, The Fourth Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Zhaoxia WangDepartment of Oncology, The Second Affiliated Hospital of Nanjing Medical University, Nanjing, China.ORCID https://orcid.org/0000-0002-1893-371X
Second Affiliated Hospital of Nanjing Medical University · CNNantong University · CN

Funding

CART AND THE HYPOTHALAMIC-PITUITARY-THYROID AXISR03TW001494 · FIC · TUFTS MEDICAL CENTER · PI LECHAN, RONALD MICHAEL · 2001 to 2003
$109k
"333 high class Talented Man Project" BRA2016509Jiangsu Graduate Scientific Research Innovation Program KYCX18_1494Medical Innovation Team Foundation of the Jiangsu Provincial Enhancement Health Project CXTDA2017021Nanjing Science and Technology Development Project 2017sc512046National Natural Science Foundation of China 81672307National Natural Science Foundation of China 81871871
6 · The paper itself

Abstract

The number of documented long noncoding RNAs (lncRNAs) has dramatically increased, and their biological functions and underlying mechanisms in pathological processes, especially cancer, remain to be elucidated. Actin filament-associated protein 1 antisense RNA 1 (AFAP1-AS1) is a 6810-nt lncRNA located on chromosome 4p16.1 that was first reported to be upregulated in esophageal adenocarcinoma tissues and cell lines. Here we reported that AFAP1-AS1, recruiting and binding to lysine-specific demethylase 1 (LSD1), was generally overexpressed in human non-small-cell lung cancer (NSCLC) tissues using quantitative real-time PCR. Higher AFAP1-AS1 expression was significantly correlated with larger tumor size (P = .008), lymph node metastasis (P = .025), higher TNM stage (P = .024), and worse overall survival in NSCLC patients. In vitro experiments revealed that AFAP1-AS1 downregulation inhibited cell migration and induced apoptosis; AFAP1-AS1 knockdown also hindered tumorigenesis in vivo. Moreover, mechanistic investigations including RNA immunoprecipitation and ChIP assays validated that AFAP1-AS1 repressed HMG box-containing protein 1 (HBP1) expression by recruiting LSD1 to the HBP1 promoter regions in PC-9 and H1975 cells. Furthermore, HBP1 functions as a tumor suppressor, and its ectopic expression hindered cell proliferation. Rescue assays determined that the oncogenic effect of AFAP1-AS1 is partially dependent on the epigenetic silencing of HBP1. In conclusion, our results indicate that AFAP1-AS1 is carcinogenic and that the AFAP1-AS1/LSD1/HBP1 axis could constitute a new therapeutic direction for NSCLC.

Indexed as

A549 CellsAnimalsCarcinoma, Non-Small-Cell LungCell Line, TumorCell ProliferationCell SurvivalEpigenesis, GeneticFemaleHigh Mobility Group ProteinsHistone DemethylasesHumansLung NeoplasmsMaleMiceNeoplasm TransplantationPrognosisAFAP1-AS1 long noncoding RNA, humanHBP1 protein, humanHigh Mobility Group ProteinsHistone DemethylasesKDM1A protein, humanRepressor ProteinsRNA, Long NoncodingAFAP1-AS1HBP1long noncoding RNALSD1non-small-cell lung cancer

Identifiers

PMID31069893
PMCPMC6609801
OpenAlexW2944329718

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.