Evidence map›Paper›PMID 31069543›Full record

ArticlePlant reproduction2019

Identification of a role for an E6-like 1 gene in early pollen-stigma interactions in Arabidopsis thaliana.

Jennifer Doucet, Christina Truong, Elizabeth Frank-Webb, Hyun Kyung Lee, Anna Daneva, Zhen Gao, Moritz K Nowack, Daphne R Goring

Open access · bronzeAbstract read
PubMed Publisher
In one paragraph

Article in Plant reproduction, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Frontiers in cell and developmental biology · 2021
    Article
  9. Immunodiversity of theFrontiers in plant science · 2020
    Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Jennifer DoucetDepartment of Cell and Systems Biology, University of Toronto, Toronto, M5S 3B2, Canada.
Christina TruongDepartment of Cell and Systems Biology, University of Toronto, Toronto, M5S 3B2, Canada.
Elizabeth Frank-WebbDepartment of Cell and Systems Biology, University of Toronto, Toronto, M5S 3B2, Canada.
Hyun Kyung LeeDepartment of Cell and Systems Biology, University of Toronto, Toronto, M5S 3B2, Canada.
Anna DanevaDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
Zhen GaoDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
Moritz K NowackDepartment of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
Daphne R GoringDepartment of Cell and Systems Biology, University of Toronto, Toronto, M5S 3B2, Canada. d.goring@utoronto.ca.ORCID 0000-0001-5295-4744
University of Toronto · CAGhent University · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

key messageWe describe a function for a novel Arabidopsis gene, E6-like 1 (E6L1), that was identified as a highly expressed gene in the stigma and plays a role in early post-pollination stages. In Arabidopsis, successful pollen-stigma interactions are dependent on rapid recognition of compatible pollen by the stigmatic papillae located on the surface of the pistil and the subsequent regulation of pollen hydration and germination, and followed by the growth of pollen tubes through the stigma surface. Here we have described the function of a novel gene, E6-like 1 (E6L1), that was identified through the analysis of transcriptome datasets, as one of highest expressed genes in the stigma, and furthermore, its expression was largely restricted to the stigma and trichomes. The first E6 gene was initially identified as a highly expressed gene during cotton fiber development, and related E6-like predicted proteins are found throughout the Angiosperms. To date, no orthologous genes have been assigned a biological function. Both the Arabidopsis E6L1 and cotton E6 proteins are predicted to be secreted, and this was confirmed using an E6L1:RFP fusion construct. To further investigate E6L1's function, one T-DNA and two independent CRISPR-generated mutants were analyzed for compatible pollen-stigma interactions, and pollen hydration, pollen adhesion, and seed set were mildly impaired for the e6l1 mutants. This work identifies E6L1 as a novel stigmatic factor that plays a role during the early post-pollination stages in Arabidopsis.

Indexed as

Gene Expression Regulation, PlantArabidopsisArabidopsis ProteinsFlowersGerminationIntercellular Signaling Peptides and ProteinsMutationOrgan SpecificityPhylogenyPollenPollen TubePollinationReproductionSeedlingsTranscriptomeArabidopsis ProteinsAT2G33850 protein, ArabidopsisIntercellular Signaling Peptides and ProteinsBAR expression anglerCompatible pollinationsE6 proteinPistilPollenStigmaTranscriptome datasets

Identifiers

PMID31069543
OpenAlexW2943520119

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.