Evidence map›Paper›PMID 31069156›Full record

ArticleOncoimmunology

TCR sequencing analysis of cancer tissues and tumor draining lymph nodes in colorectal cancer patients.

Tatsuo Matsuda, Eisaku Miyauchi, Yu-Wen Hsu, Satoshi Nagayama, Kazuma Kiyotani, Makda Zewde, Jae-Hyun Park, Taigo Kato, Makiko Harada, Shimpei Matsui and 9 more

Abstract read
In one paragraph

Article in Oncoimmunology. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Review
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  3. Review
  4. Article
  5. Observational
  6. Review
  7. Review
  8. Review
  9. Article
  10. Human TCR repertoire in cancer.Cancer medicine · 2024
    Review
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors.

Tatsuo MatsudaDepartment of Medicine, The University of Chicago, Chicago, IL, USA.
Eisaku MiyauchiDepartment of Medicine, The University of Chicago, Chicago, IL, USA.
Yu-Wen HsuDepartment of Medicine, The University of Chicago, Chicago, IL, USA.
Satoshi NagayamaDepartment of Gastroenterological Surgery, Gastroenterological Center, Cancer Institute Hospital, Japanese Foundation for Cancer Research, Tokyo, Japan.
Kazuma KiyotaniCancer Precision Medicine Center, Japanese Foundation for Cancer Research, Tokyo, Japan.
Makda ZewdeDepartment of Medicine, The University of Chicago, Chicago, IL, USA.
Jae-Hyun ParkDepartment of Medicine, The University of Chicago, Chicago, IL, USA.
Taigo KatoDepartment of Medicine, The University of Chicago, Chicago, IL, USA.
Makiko HaradaDepartment of Medicine, The University of Chicago, Chicago, IL, USA.
Shimpei MatsuiDepartment of Gastroenterological Surgery, Gastroenterological Center, Cancer Institute Hospital, Japanese Foundation for Cancer Research, Tokyo, Japan.
Masashi UenoDepartment of Gastroenterological Surgery, Gastroenterological Center, Cancer Institute Hospital, Japanese Foundation for Cancer Research, Tokyo, Japan.
Kazumasa FukudaDepartment of Surgery, Keio University School of Medicine, Tokyo, Japan.
Nobuaki SuzukiDepartment of Gastroenterological, Breast and Endocrine Surgery, Yamaguchi University Graduate School of Medicine, Yamaguchi, Japan.
Shoichi HazamaDepartment of Gastroenterological, Breast and Endocrine Surgery, Yamaguchi University Graduate School of Medicine, Yamaguchi, Japan.
Hiroaki NaganoDepartment of Gastroenterological, Breast and Endocrine Surgery, Yamaguchi University Graduate School of Medicine, Yamaguchi, Japan.
Hiroya TakeuchiDepartment of Surgery, Keio University School of Medicine, Tokyo, Japan.
Wickii T VigneswaranDepartment of Thoracic and Cardiovascular Surgery, Loyola University Medical Center, Maywood, IL, USA.
Yuko KitagawaDepartment of Surgery, Keio University School of Medicine, Tokyo, Japan.
Yusuke NakamuraDepartment of Medicine, The University of Chicago, Chicago, IL, USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Tumor draining lymph nodes (TDLNs) are located in the routes of lymphatic drainage from a primary tumor and have the highest risk of metastasis in various types of solid tumors. TDLNs are also considered as a tissue to activate the antitumor immunity, where antigen-specific effector T cells are generated. However, T cell receptor (TCR) repertoires in TDLNs have not been well characterized. We collected 23 colorectal cancer tumors with 203 lymph nodes with/without metastatic cancer cells (67 were metastasis-positive and the remaining 136 were metastasis-negative) and performed TCR sequencing. Metastasis-positive TDLNs showed a significantly lower TCR diversity and shared TCR clonotypes more frequently with primary tumor tissues compared to metastasis-negative TDLNs. Principal component analysis indicated that TDLNs with metastasis showed similar TCR repertoires. These findings suggest that cancer-reactive T cell clones could be enriched in the metastasis-positive TDLNs.

Indexed as

colorectal cancerimmunogenomicsimmunotherapylymph nodeT cell receptor

Identifiers

PMID31069156
PMCPMC6492974

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.