Evidence map›Paper›PMID 31067058›Full record

ArticleThe journal of physical chemistry letters2019

Surface-Templated Nanobubbles Protect Proteins from Surface-Mediated Denaturation.

David S Bull, Daniel F Kienle, Andres F Chaparro Sosa, Nathaniel Nelson, Shambojit Roy, Jennifer N Cha, Daniel K Schwartz, Joel L Kaar, Andrew P Goodwin

Open access · greenAbstract read
In one paragraph

Article in The journal of physical chemistry letters, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

David S BullDepartment of Chemical and Biological Engineering , University of Colorado Boulder , Boulder , Colorado 80303 , United States.
Daniel F KienleDepartment of Chemical and Biological Engineering , University of Colorado Boulder , Boulder , Colorado 80303 , United States.ORCID http://orcid.org/0000-0002-0962-4608
Andres F Chaparro SosaDepartment of Chemical and Biological Engineering , University of Colorado Boulder , Boulder , Colorado 80303 , United States.ORCID http://orcid.org/0000-0003-4094-6194
Nathaniel NelsonDepartment of Chemical and Biological Engineering , University of Colorado Boulder , Boulder , Colorado 80303 , United States.
Shambojit RoyDepartment of Chemical and Biological Engineering , University of Colorado Boulder , Boulder , Colorado 80303 , United States.
Jennifer N ChaDepartment of Chemical and Biological Engineering , University of Colorado Boulder , Boulder , Colorado 80303 , United States.ORCID http://orcid.org/0000-0002-2840-1653
Daniel K SchwartzDepartment of Chemical and Biological Engineering , University of Colorado Boulder , Boulder , Colorado 80303 , United States.
Joel L KaarDepartment of Chemical and Biological Engineering , University of Colorado Boulder , Boulder , Colorado 80303 , United States.ORCID http://orcid.org/0000-0002-0794-3955
Andrew P GoodwinDepartment of Chemical and Biological Engineering , University of Colorado Boulder , Boulder , Colorado 80303 , United States.ORCID http://orcid.org/0000-0002-7284-4005
University of Colorado Boulder · US

Funding

Rapid, Multiscale Sensing Using Acoustic Detection MechanismsDP2EB020401 · NIBIB · UNIVERSITY OF COLORADO · PI GOODWIN, ANDREW P · 2014 to 2017
$2.3M
Effect of Container Surface Structure on Cavitation-Induced Protein Particulate FormationR21EB026006 · NIBIB · UNIVERSITY OF COLORADO · PI GOODWIN, ANDREW P, RANDOLPH, THEODORE W · 2018 to 2019
$524k
NIBIB NIH HHS DP2 EB020401NIBIB NIH HHS R21 EB026006
6 · The paper itself

Abstract

In this Letter, we report that surface-bound nanobubbles reduce protein denaturation on methylated glass by irreversible protein shell formation. Single-molecule total internal reflection fluorescence (SM-TIRF) microscopy was combined with intramolecular Förster resonance energy transfer (FRET) to study the conformational dynamics of nitroreductase (NfsB) on nanobubble-laden methylated glass surfaces, using reflection brightfield microscopy to register nanobubble locations with NfsB adsorption. First, NfsB adsorbed irreversibly to nanobubbles with no apparent desorption after 5 h. Moreover, virtually all (96%) of the NfsB molecules that interacted with nanobubbles remained folded, whereas less than 50% of NfsB molecules remained folded in the absence of nanobubbles on unmodified silica or methylated glass surfaces. This trend was confirmed by ensemble-average fluorometer TIRF experiments. We hypothesize that nanobubbles reduce protein damage by passivating strongly denaturing topographical surface defects. Thus, nanobubble stabilization on surfaces may have important implications for antifouling surfaces and improving therapeutic protein storage.

Indexed as

AdsorptionFluorescence Resonance Energy TransferGlassNanostructuresNitroreductasesProtein ConformationProtein DenaturationSilicon DioxideSurface PropertiesNitroreductasesSilicon Dioxide

Identifiers

PMID31067058
PMCPMC8051143
OpenAlexW2944120310

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.