Evidence map›Paper›PMID 31064840›Full record

ArticleThe Journal of biological chemistry2019

Disordered protein interactions for an ordered cellular transition: Cdc2-like kinase 1 is transported to the nucleus via its Ser-Arg protein substrate.

Athira George, Brandon E Aubol, Laurent Fattet, Joseph A Adams

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. CLK1 reorganizes the splicing factor U1-70K for early spliceosomal protein assembly.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  5. Review
  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Athira GeorgeFrom the Department of Pharmacology, University of California San Diego, La Jolla, California 92093-0636.
Brandon E AubolFrom the Department of Pharmacology, University of California San Diego, La Jolla, California 92093-0636.
Laurent FattetFrom the Department of Pharmacology, University of California San Diego, La Jolla, California 92093-0636.ORCID 0000-0001-5152-4937
Joseph A AdamsFrom the Department of Pharmacology, University of California San Diego, La Jolla, California 92093-0636 j2adams@ucsd.edu.
University of California San Diego · US

Funding

Role of protein phosphorylation in RNA splicingR01GM067969 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ADAMS, JOSEPH · 2004 to 2024
$6.4M
Clk Kinases and Splicing RegulationR01GM098528 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ADAMS, JOSEPH · 2012 to 2019
$2.5M
NIGMS NIH HHS R01 GM067969NIGMS NIH HHS R01 GM098528
6 · The paper itself

Abstract

Serine-arginine (SR) proteins are essential splicing factors that promote numerous steps associated with mRNA processing and whose biological function is tightly regulated through multi-site phosphorylation. In the nucleus, the cdc2-like kinases (CLKs) phosphorylate SR proteins on their intrinsically disordered Arg-Ser (RS) domains, mobilizing them from storage speckles to the splicing machinery. The CLKs have disordered N termini that bind tightly to RS domains, enhancing SR protein phosphorylation. The N termini also promote nuclear localization of CLKs, but their transport mechanism is presently unknown. To explore cytoplasmic-nuclear transitions, several classical nuclear localization sequences in the N terminus of the CLK1 isoform were identified, but their mutation had no effect on subcellular localization. Rather, we found that CLK1 amplifies its presence in the nucleus by forming a stable complex with the SR protein substrate and appropriating its NLS for transport. These findings indicate that, along with their well-established roles in mRNA splicing, SR proteins use disordered protein-protein interactions to carry their kinase regulator from the cytoplasm to the nucleus.

Indexed as

Amino Acid SequenceArgininebeta KaryopherinsCell NucleusHeLa CellsHumansPhosphorylationProtein ConformationProtein Serine-Threonine KinasesProtein-Tyrosine KinasesSequence HomologySerineSerine-Arginine Splicing FactorsSubstrate SpecificityArgininebeta KaryopherinsClk dual-specificity kinasesProtein Serine-Threonine KinasesProtein-Tyrosine KinasesSerineSerine-Arginine Splicing FactorsSRSF1 protein, humanTNPO1 protein, humanArg–Ser repeatcdc2-like kinase (CLK)intrinsically disordered proteinnuclear translocationphosphorylationpost-transcriptional regulationRNA processingRNA splicingserine/threonine protein kinasesplicing factorSR protein

Identifiers

PMID31064840
PMCPMC6579451
OpenAlexW2944648051

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.