Evidence map›Paper›PMID 31064833›Full record

ArticlemBio2019

Authentic Modeling of Human Respiratory Virus Infection in Human Pluripotent Stem Cell-Derived Lung Organoids.

M Porotto, M Ferren, Y-W Chen, Y Siu, N Makhsous, B Rima, T Briese, A L Greninger, H-W Snoeck, A Moscona

Open access · goldAbstract readVideo-Audio Media
In one paragraph

Article in mBio, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 103 papers, 5 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
103citing papers in PubMed, 5 pooled it
15.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

103 citing papers in PubMed, 5 syntheses or guidelines pooled it, 152 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Frontiers in immunology · 2021
    Pooled it
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  6. Article
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  8. Review
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  13. Article
  14. Human lung organoids model for assessing host response toFrontiers in cellular and infection microbiology · 2026
    Article
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43 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 3 countries.

M PorottoDepartment of Pediatrics, Columbia University Medical Center, New York, New York, USA.
M FerrenDepartment of Pediatrics, Columbia University Medical Center, New York, New York, USA.
Y-W ChenColumbia Center for Human Development, Columbia University Medical Center, New York, New York, USA.
Y SiuDepartment of Pediatrics, Columbia University Medical Center, New York, New York, USA.
N MakhsousDepartment of Laboratory Medicine, University of Washington, Seattle, Washington, USA.
B RimaCenter for Experimental Medicine, Queen's University, Belfast, Northern Ireland, United Kingdom.
T BrieseCenter for Infection and Immunity, Mailman School of Public Health, Columbia University, New York, New York, USA.
A L GreningerDepartment of Laboratory Medicine, University of Washington, Seattle, Washington, USA.
H-W SnoeckColumbia Center for Human Development, Columbia University Medical Center, New York, New York, USA.
A MosconaDepartment of Pediatrics, Columbia University Medical Center, New York, New York, USA Am939@cumc.columbia.edu.
Columbia University Irving Medical Center · USColumbia University · USFred Hutch Cancer Center · USHastings Center · USQueen's University Belfast · GBUniversity of Campania "Luigi Vanvitelli" · ITUniversity of Washington · US

Funding

Modeling, pathogenesis and treatment of idiopathic pulmonary fibrosisU01HL134760 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI SNOECK, HANS-WILLEM E, VUNJAK-NOVAKOVIC, GORDANA · 2016 to 2022
$8.5M
Molecular basis for paramyxovirus entryR01AI031971 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI MOSCONA, ANNE · 1998 to 2016
$6.6M
Engineering protease-resistant alpha-beta peptides for broad-spectrum antiviralsR01AI114736 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI MOSCONA, ANNE · 2015 to 2019
$3.7M
Mechanisms of measles virus CNS adaptationR01NS091263 · NINDS · WEILL MEDICAL COLL OF CORNELL UNIV · PI POROTTO, MATTEO · 2015 to 2019
$1.9M
NHLBI NIH HHS U01 HL134760NIAID NIH HHS R01 AI031971NIAID NIH HHS R01 AI114736NINDS NIH HHS R01 NS091263
6 · The paper itself

Abstract

Infectious viruses so precisely fit their hosts that the study of natural viral infection depends on host-specific mechanisms that affect viral infection. For human parainfluenza virus 3, a prevalent cause of lower respiratory tract disease in infants, circulating human viruses are genetically different from viruses grown in standard laboratory conditions; the surface glycoproteins that mediate host cell entry on circulating viruses are suited to the environment of the human lung and differ from those of viruses grown in cultured cells. Polarized human airway epithelium cultures have been used to represent the large, proximal airways of mature adult airways. Here we modeled respiratory virus infections that occur in children or infect the distal lung using lung organoids that represent the entire developing infant lung. These 3D lung organoids derived from human pluripotent stem cells contain mesoderm and pulmonary endoderm and develop into branching airway and alveolar structures. Whole-genome sequencing analysis of parainfluenza viruses replicating in the organoids showed maintenance of nucleotide identity, suggesting that no selective pressure is exerted on the virus in this tissue. Infection with parainfluenza virus led to viral shedding without morphological changes, while respiratory syncytial virus infection induced detachment and shedding of infected cells into the lung organoid lumens, reminiscent of parainfluenza and respiratory syncytial virus in human infant lungs. Measles virus infection, in contrast, induced syncytium formation. These human stem cell-derived lung organoids may serve as an authentic model for respiratory viral pathogenesis in the developing or infant lung, recapitulating respiratory viral infection in the host.

Indexed as

Alveolar Epithelial CellsCell DifferentiationCells, CulturedGenome, ViralHumansInfantLungMeasles virusOrganoidsParainfluenza Virus 3, HumanPluripotent Stem CellsRespiratory Syncytial Virus, HumanRespirovirus InfectionsVirus InternalizationWhole Genome Sequencinglung organoidsparainfluenza virusrespiratory virusestissue infection model

Identifiers

PMID31064833
PMCPMC6509192
OpenAlexW2944420557

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.