Evidence map›Paper›PMID 31063152›Full record

ArticleActa crystallographica. Section D, Structural biology2019

Structural analysis of a replication protein encoded by a plasmid isolated from a multiple sclerosis patient.

Turgay Kilic, Alexander N Popov, Amelie Burk-Körner, Anna Koromyslova, Harald Zur Hausen, Timo Bund, Grant S Hansman

Abstract read
In one paragraph

Article in Acta crystallographica. Section D, Structural biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Analysis of chronic inflammatory lesions of the colon for BMMF Rep antigen expression and CD68 macrophage interactions.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Turgay KilicSchaller Research Group at the University of Heidelberg, Heidelberg, Germany.ORCID 0000-0003-2233-950X
Alexander N PopovStructural Biology Group, European Synchrotron Radiation Facility (ESRF), Grenoble, France.
Amelie Burk-KörnerGerman Cancer Research Center (DKFZ), Heidelberg, Germany.
Anna KoromyslovaSchaller Research Group at the University of Heidelberg, Heidelberg, Germany.
Harald Zur HausenGerman Cancer Research Center (DKFZ), Heidelberg, Germany.
Timo BundGerman Cancer Research Center (DKFZ), Heidelberg, Germany.
Grant S HansmanSchaller Research Group at the University of Heidelberg, Heidelberg, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bovine meat and milk factors (BMMFs) are circular, single-stranded episomal DNAs that have been detected in bovine meat and milk products. BMMFs are thought to have roles in human malignant and degenerative diseases. BMMFs encode a replication initiator protein (Rep) that is actively transcribed and translated in human cells. In this study, a Rep WH1 domain encoded on a BMMF (MSBI1.176) isolated from a multiple sclerosis human brain sample was determined to 1.53 Å resolution using X-ray crystallography. The overall structure of the MSBI1.176 WH1 domain was remarkably similar to other Rep structures, despite having a low (28%) amino-acid sequence identity. The MSBI1.176 WH1 domain contained elements common to other Reps, including five α-helices, five β-strands and a hydrophobic pocket. These new findings suggest that the MSBI1.176 Rep might have comparable roles and functions to other known Reps of different origins.

Indexed as

Amino Acid SequenceAnimalsBrainCattleCrystallography, X-RayDNA HelicasesHumansModels, MolecularMultiple SclerosisPlasmidsProtein BindingProtein ConformationProtein DomainsSequence HomologyTrans-ActivatorsDNA Helicasesreplication initiator proteinTrans-Activatorsbovine meat and milk factorsepisomal circular DNAmultiple sclerosistrans-acting replication initiator proteinX-ray crystal structure

Identifiers

PMID31063152
PMCPMC6503762

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.