Evidence map›Paper›PMID 31063092›Full record

ArticleEpidemiology and infection2019

Extension of the known distribution of a novel clade C betacoronavirus in a wildlife host.

I F Saldanha, B Lawson, H Goharriz, J Rodriguez-Ramos Fernandez, S K John, A R Fooks, A A Cunningham, N Johnson, D L Horton

Open access · hybridAbstract read
In one paragraph

Article in Epidemiology and infection, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
3.4field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 41 citations in OpenAlex.

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  14. Do Urban Hedgehogs (Pathogens (Basel, Switzerland) · 2023
    Review
  15. Erinaceus coronavirus persistence in hedgehogs (Frontiers in veterinary science · 2023
    Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

I F SaldanhaSchool of Veterinary Medicine, University of Surrey,Guildford,UK.
B LawsonInstitute of Zoology, Zoological Society of London,London,UK.
H GoharrizWildlife Zoonoses & Vector-Borne Diseases Research Group, Animal and Plant Health Agency, New Haw, Addlestone,Surrey, KT15 3NB,UK.
J Rodriguez-Ramos FernandezIDEXX Laboratories Ltd.,Wetherby, West Yorkshire,UK.
S K JohnInstitute of Zoology, Zoological Society of London,London,UK.
A R FooksWildlife Zoonoses & Vector-Borne Diseases Research Group, Animal and Plant Health Agency, New Haw, Addlestone,Surrey, KT15 3NB,UK.
A A CunninghamInstitute of Zoology, Zoological Society of London,London,UK.
N JohnsonWildlife Zoonoses & Vector-Borne Diseases Research Group, Animal and Plant Health Agency, New Haw, Addlestone,Surrey, KT15 3NB,UK.
D L HortonSchool of Veterinary Medicine, University of Surrey,Guildford,UK.ORCID 0000-0002-9126-2756
Zoological Society of London · GBAnimal and Plant Health Agency · GBUniversity of Surrey · GBIDEXX Laboratories (France) · FRUniversity of Liverpool · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Disease surveillance in wildlife populations presents a logistical challenge, yet is critical in gaining a deeper understanding of the presence and impact of wildlife pathogens. Erinaceus coronavirus (EriCoV), a clade C Betacoronavirus, was first described in Western European hedgehogs (Erinaceus europaeus) in Germany. Here, our objective was to determine whether EriCoV is present, and if it is associated with disease, in Great Britain (GB). An EriCoV-specific BRYT-Green® real-time reverse transcription PCR assay was used to test 351 samples of faeces or distal large intestinal tract contents collected from casualty or dead hedgehogs from a wide area across GB. Viral RNA was detected in 10.8% (38) samples; however, the virus was not detected in any of the 61 samples tested from Scotland. The full genome sequence of the British EriCoV strain was determined using next generation sequencing; it shared 94% identity with a German EriCoV sequence. Multivariate statistical models using hedgehog case history data, faecal specimen descriptions and post-mortem examination findings found no significant associations indicative of disease associated with EriCoV in hedgehogs. These findings indicate that the Western European hedgehog is a reservoir host of EriCoV in the absence of apparent disease.

Indexed as

Animal DiseasesAnimalsBetacoronavirusCoronavirus InfectionsFecesHedgehogsIntestinesReal-Time Polymerase Chain ReactionReverse Transcriptase Polymerase Chain ReactionUnited KingdomCoronavirusgeographical information systemsvirologywildlifezoonoses

Identifiers

PMID31063092
PMCPMC6518468
OpenAlexW2935352357

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.