Evidence map›Paper›PMID 31062087›Full record

ArticleBioprocess and biosystems engineering2019

Dynamic changes of metabolomics and expression of candicidin biosynthesis gene cluster caused by the presence of a pleiotropic regulator AdpA in Streptomyces ZYJ-6.

Xiaoyun Liu, Xiaojuan Sun, Weimin He, Xiwei Tian, Yingping Zhuang, Ju Chu

Abstract read
PubMed Publisher
In one paragraph

Article in Bioprocess and biosystems engineering, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 24 citations in OpenAlex.

  1. Sodium ion stress accelerates cell lysis inApplied and environmental microbiology · 2026
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  4. Review
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  6. Improving butenyl-spinosyn production inFrontiers in microbiology · 2025
    Article
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  9. Article
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  11. Article
  12. Article
  13. Harnessing microbial metabolomics for industrial applications.World journal of microbiology & biotechnology · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Xiaoyun LiuState Key Laboratory of Bioreactor Engineering, School of Biochemical Engineering, East China University of Science and Technology, Room 413, Building 18, Shanghai, 200237, People's Republic of China.
Xiaojuan SunState Key Laboratory of Bioreactor Engineering, School of Biochemical Engineering, East China University of Science and Technology, Room 413, Building 18, Shanghai, 200237, People's Republic of China.
Weimin HeState Key Laboratory of Bioreactor Engineering, School of Biochemical Engineering, East China University of Science and Technology, Room 413, Building 18, Shanghai, 200237, People's Republic of China.
Xiwei TianState Key Laboratory of Bioreactor Engineering, School of Biochemical Engineering, East China University of Science and Technology, Room 413, Building 18, Shanghai, 200237, People's Republic of China.
Yingping ZhuangState Key Laboratory of Bioreactor Engineering, School of Biochemical Engineering, East China University of Science and Technology, Room 413, Building 18, Shanghai, 200237, People's Republic of China.
Ju ChuState Key Laboratory of Bioreactor Engineering, School of Biochemical Engineering, East China University of Science and Technology, Room 413, Building 18, Shanghai, 200237, People's Republic of China. juchu@ecust.edu.cn.
East China University of Science and Technology · CN

Funding

National Key Special Program 2017YFF 0204600NWO-MoST Joint Program 2013DFG32630the National Basic Research Program of China (973 Program) No. 2012CB721000G
6 · The paper itself

Abstract

Candicidin is one of the frequent antibiotics for its high antifungal activity, but the productivity is still extremely low. Introduction of adpA into Streptomyces ZYJ-6 could improve candicidin productivity significantly and achieved 9338 μg/mL, which was the highest value ever reported in the literature. Combined analyses of transcriptional levels, metabolic flux and metabolomics indicate that para-aminobenzoic acid and the first step of shikimic acid metabolism were not the bottleneck for the candicidin production in the control. However, methylmalonyl-CoA played a central role in the candicidin production and the gene methB responsible for the biosynthesis of methylmalonyl-CoA might be the candidate gene target for further improving the production of candicidin.

Indexed as

Gene Expression Regulation, BacterialMultigene FamilyBacterial ProteinsCandicidinMetabolomicsStreptomycesTrans-ActivatorsBacterial ProteinsCandicidinTrans-ActivatorsCandicidinFBAMetabolomicsqRT-PCRStreptomyces

Identifiers

PMID31062087
OpenAlexW2944244152

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.