Evidence map›Paper›PMID 31061513›Full record

ArticleScientific reports2019

Proteomic and structural differences in lumpfish skin among the dorsal, caudal and ventral regions.

Deepti M Patel, Katarina Bhide, Mangesh Bhide, Martin H Iversen, Monica F Brinchmann

Open access · goldAbstract readComparative Study
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 14 citations in OpenAlex.

  1. Should a Dorsal or Anal Scale Be Used for Microcharacteristics Analysis inAnimals : an open access journal from MDPI · 2026
    Article
  2. Natterin bridges IFN-φ1 and non-canonical inflammasome pathways viaFrontiers in cellular and infection microbiology · 2025
    Article
  3. Article
  4. Article
  5. Proteomic profile of epidermal mucus fromFish and shellfish immunology reports · 2023
    Article
  6. Article
  7. Article
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Deepti M PatelFaculty of Biosciences and Aquaculture, Nord University, 8049, Bodø, Norway.ORCID http://orcid.org/0000-0003-4286-239X
Katarina BhideLaboratory of Biomedical Microbiology and Immunology, 73, 04181, University of Veterinary Medicine and Pharmacy, Košice, Slovakia.
Mangesh BhideLaboratory of Biomedical Microbiology and Immunology, 73, 04181, University of Veterinary Medicine and Pharmacy, Košice, Slovakia.ORCID http://orcid.org/0000-0001-8734-4364
Martin H IversenFaculty of Biosciences and Aquaculture, Nord University, 8049, Bodø, Norway.ORCID http://orcid.org/0000-0002-4179-2804
Monica F BrinchmannFaculty of Biosciences and Aquaculture, Nord University, 8049, Bodø, Norway. monica.f.brinchmann@nord.no.ORCID http://orcid.org/0000-0002-1222-0743
Nord University · NOUniversity of Veterinary Medicine in Košice · SK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fish skin is a vital organ that serves a multitude of functions including mechanical protection, homeostasis, osmoregulation and protection against diseases. The expression of skin proteins changes under different physiological conditions. However, little is known about differences in protein expression among various body sites in naïve fish. The objectives of this work is to study potential differences in protein and gene expression among dorsal, caudal and ventral regions of lumpfish skin employing 2D gel based proteomics and real-time PCR and to assess structural differences between these regions by using Alcian blue and Periodic acid Schiff stained skin sections. The proteins collagen alfa-1, collagen alfa-2, heat shock cognate 71 kDa, histone H4, parvalbumin, natterin-2, 40S ribosomal protein S12, topoisomerase A and topoisomerase B were differentially expressed among the three regions. mRNA expression of apoa1, hspa8 and hist1h2b showed significant differences between regions. Skin photomicrographs showed differences in epidermal thickness and goblet cell counts. The ventral region showed relatively high protein expression, goblet cell count and epidermal thickness compared to dorsal and caudal regions. Overall, this study provides an important benchmark for comparative analysis of skin proteins and structure between different parts of the lumpfish body.

Indexed as

AnimalsApolipoprotein A-ICollagen Type IDNA TopoisomerasesFish ProteinsGene ExpressionGene Expression ProfilingGene OntologyGoblet CellsHeat-Shock ProteinsHistonesMolecular Sequence AnnotationOrgan SpecificityParvalbuminsPerciformesProtein Interaction MappingApolipoprotein A-ICollagen Type IDNA TopoisomerasesFish ProteinsHeat-Shock ProteinsHistonesParvalbuminsProtein IsoformsRibosomal Proteins

Identifiers

PMID31061513
PMCPMC6502863
OpenAlexW2943374392

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.