Evidence map›Paper›PMID 31061443›Full record

ArticleScientific reports2019

Investigation of evolutionary and expressional relationships in the function of the leucine-rich repeat receptor-like protein kinase gene family (LRR-RLK) in the radish (Raphanus sativus L.).

Jinglei Wang, Tianhua Hu, Wuhong Wang, Haijiao Hu, Qingzhen Wei, Chonglai Bao

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
4.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Genome-Wide Identification ofFrontiers in plant science · 2020
    Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Jinglei WangInstitute of Vegetable Research, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China.
Tianhua HuInstitute of Vegetable Research, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China.
Wuhong WangInstitute of Vegetable Research, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China.
Haijiao HuInstitute of Vegetable Research, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China.
Qingzhen WeiInstitute of Vegetable Research, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China.
Chonglai BaoInstitute of Vegetable Research, Zhejiang Academy of Agricultural Sciences, Hangzhou, 310021, China. baocl@mail.zaas.ac.cn.
ZheJiang Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The leucine-rich repeat receptor-like protein kinase (LRR-RLK) plays an important role in plant development and disease defence. Although genome-wide studies of LRR-RLKs have been performed in several species, a comprehensive analysis, including evolutionary, structural and expressional analyses and their relationships to function, has not been carried out in the radish (Raphanus sativus L.). In this study, we identified 292 LRR-RLK genes in the R. sativus genome and classified them into 23 subgroups. The subgroups containing genes involved in defence were more likely to evolve from tandem duplication rather than whole genome triplication (WGT), had lower expression profiles and were expressed in fewer tissues than the subgroups related to development. Gene structures and conserved domains did not differ in the defence-related or development-related subgroups, but they were distinct in each subgroup. This study sheds light on the evolutionary and expressional relationships with the functions of R. sativus LRR-RLKs and provides an integrated framework for additional investigation into these functions.

Indexed as

Evolution, MolecularGene Expression Regulation, PlantMultigene FamilyChromosome MappingConserved SequenceGenome, PlantGenomicsLeucine-Rich Repeat ProteinsNucleotide MotifsPhylogenyProteinsProtein Serine-Threonine KinasesRaphanusLeucine-Rich Repeat ProteinsProteinsProtein Serine-Threonine Kinases

Identifiers

PMID31061443
PMCPMC6503142
OpenAlexW2943053839

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.