Evidence map›Paper›PMID 31061442›Full record

ArticleScientific reports2019

Distribution of Functional CD4 and CD8 T cell Subsets in Blood and Rectal Mucosal Tissues.

Praveen Kumar Amancha, Cassie G Ackerley, Chandni Duphare, Mark Lee, Yi-Juan Hu, Rama R Amara, Colleen F Kelley

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
  3. The pathogenesis of cryptoglandular anal fistula: New insight into the immunological profile.Colorectal disease : the official journal of the Association of Coloproctology of Great Britain and Ireland · 2022
    Article
  4. CXCR5Journal of immunology (Baltimore, Md. : 1950) · 2021
    Review
  5. Article
  6. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Praveen Kumar AmanchaThe Hope Clinic of the Emory Vaccine Research Center, Division of Infectious Diseases, Department of Medicine, Emory University School of Medicine, Decatur, GA, 30030, United States.
Cassie G AckerleyThe Hope Clinic of the Emory Vaccine Research Center, Division of Infectious Diseases, Department of Medicine, Emory University School of Medicine, Decatur, GA, 30030, United States.
Chandni DuphareYerkes National Primate Research Center, Emory Vaccine Center, Atlanta, GA, 30329, United States.
Mark LeeYerkes National Primate Research Center, Emory Vaccine Center, Atlanta, GA, 30329, United States.
Yi-Juan HuDepartment of Biostatistics and Bioinformatics, Rollins School of Public Health, Emory University, Atlanta, GA, 30322, United States.
Rama R AmaraYerkes National Primate Research Center, Emory Vaccine Center, Atlanta, GA, 30329, United States.ORCID http://orcid.org/0000-0002-6309-6797
Colleen F KelleyThe Hope Clinic of the Emory Vaccine Research Center, Division of Infectious Diseases, Department of Medicine, Emory University School of Medicine, Decatur, GA, 30030, United States. colleen.kelley@emory.edu.ORCID http://orcid.org/0000-0001-5611-0119
Emory University · USEmory National Primate Research Center

Funding

Yerkes National Primate Research Center Role of type-I IFN in regulating COVID-19 induced inflammation and pathogenesisP51OD011132 · OD · EMORY UNIVERSITY · PI Joon Sup Lee · 2012 to 2026
$167.0M
Virology and Molecular Biomarkers CoreP30AI050409 · NIAID · EMORY UNIVERSITY · PI Carlos del Rio · 2002 to 2026
$74.0M
Atlanta Clinical and Translational Science Institute (ACTSI) RenewalUL1TR000454 · NCATS · EMORY UNIVERSITY · PI STEPHENS, DAVID S · 2012 to 2016
$25.8M
Targeting mTOR to Enhance Immunogenicity and Efficacy of HIV VaccinesP01AI088575 · NIAID · EMORY UNIVERSITY · PI AMARA, RAMA RAO · 2010 to 2013
$11.4M
Preclinical Studies and T cell ResponsesU19AI109633 · NIAID · EMORY UNIVERSITY · PI VELU, VIJAYAKUMAR · 2014 to 2018
$10.2M
Research Training in Translational Gastroenterology and HepatologyT32DK108735 · NIDDK · EMORY UNIVERSITY · PI SUBRA KUGATHASAN · 2016 to 2026
$2.6M
Understanding Rectal HIV transmission among At-risk MSM: Age, Intercourse, and Mucosal InjurR01AI128799 · NIAID · EMORY UNIVERSITY · PI KELLEY, COLLEEN F · 2017 to 2020
$2.4M
STI and Implications for HIV Transmission and PreventionR01HD092033 · NICHD · EMORY UNIVERSITY · PI KELLEY, COLLEEN F · 2017 to 2020
$1.9M
Association Tests of Rare Variants Using Sequence Reads without Calling GenotypesR01GM116065 · NIGMS · EMORY UNIVERSITY · PI HU, YIJUAN · 2015 to 2019
$1.5M
Defining the rectal mucosa in MSM at risk of HIV infectionK23AI108335 · NIAID · EMORY UNIVERSITY · PI KELLEY, COLLEEN F · 2013 to 2017
$855k
NCATS NIH HHS UL1 TR000454NIAID NIH HHS K23 AI108335NIAID NIH HHS P01 AI088575NIAID NIH HHS P30 AI050409NIAID NIH HHS U19 AI109633NICHD NIH HHS R01 HD092033NIDDK NIH HHS T32 DK108735NIGMS NIH HHS R01 GM116065NIH HHS P51 OD011132U.S. Department of Health & Human Services | NIH | National Center for Advancing Translational Sciences (NCATS) UL1TR000454U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) AI128799U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) R01GM116065
6 · The paper itself

Abstract

A better understanding of the distribution and functional capacity of CD4 T helper (Th) and CD8 T cytotoxic (Tc) cell subsets in the rectal mucosa (RM), a major site for HIV acquisition and replication, in adults is needed. In this study, we compared the distribution of Th and Tc cell subsets between blood and RM compartments in 62 HIV negative men, focusing primarily on IL-17-producing CD4 and CD8 T cells due to their importance in establishing and maintaining mucosal defenses, and examined associations between the frequencies of Th17 and Tc17 cell subsets and the availability of highly HIV-susceptible target cells in the RM. The RM exhibited a distinct immune cell composition comprised of higher frequencies of Th2, Th17, and Tc17 cells compared to the peripheral blood. The majority of Tc17 cells in RM were quadruple-cytokine producers (IL-17A

Indexed as

AdolescentAdultCase-Control StudiesCD4-Positive T-LymphocytesCD8-Positive T-LymphocytesCohort StudiesHIVHIV InfectionsHumansInterleukin-17Leukocytes, MononuclearMaleMiddle AgedMucous MembraneT-Lymphocytes, CytotoxicT-Lymphocyte SubsetsIL17A protein, humanInterleukin-17

Identifiers

PMID31061442
PMCPMC6502862
OpenAlexW2943179746

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.