Evidence map›Paper›PMID 31061400›Full record

ArticleScientific reports2019

Tobacco-Related Alterations in Airway Gene Expression are Rapidly Reversed Within Weeks Following Smoking-Cessation.

Kahkeshan Hijazi, Bozena Malyszko, Katrina Steiling, Xiaohui Xiao, Gang Liu, Yuriy O Alekseyev, Yves-Martine Dumas, Louise Hertsgaard, Joni Jensen, Dorothy Hatsukami and 5 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 23 citations in OpenAlex.

  1. Trial
  2. Human Primary Mesenchymal Stem Cells Fail to Recover Full Osteogenic Differentiation Potential Following Washout of Electronic Cigarette Aerosol Extracts.Nicotine & tobacco research : official journal of the Society for Research on Nicotine and Tobacco · 2026
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  6. Design of the SPIROMICS Study of Early COPD Progression: SOURCE Study.Chronic obstructive pulmonary diseases (Miami, Fla.) · 2024
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  7. Article
  8. Article
  9. Article
  10. Article
  11. Pathway analysis of smoking-induced changes in buccal mucosal gene expression.The Egyptian journal of medical human genetics · 2022
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 2 institutions in 1 country.

Kahkeshan HijaziDepartment of Medicine, Section of Computational Biomedicine, Boston University School of Medicine, Boston, Massachusetts, United States.ORCID http://orcid.org/0000-0001-8371-4540
Bozena MalyszkoDepartment of Medicine, Section of Computational Biomedicine, Boston University School of Medicine, Boston, Massachusetts, United States.
Katrina SteilingDepartment of Medicine, Section of Computational Biomedicine, Boston University School of Medicine, Boston, Massachusetts, United States.
Xiaohui XiaoDepartment of Medicine, Section of Computational Biomedicine, Boston University School of Medicine, Boston, Massachusetts, United States.
Gang LiuDepartment of Medicine, Section of Computational Biomedicine, Boston University School of Medicine, Boston, Massachusetts, United States.
Yuriy O AlekseyevDepartment of Pathology and Laboratory Medicine, Boston University School of Medicine, Boston, Massachusetts, United States.
Yves-Martine DumasDepartment of Medicine, Section of Computational Biomedicine, Boston University School of Medicine, Boston, Massachusetts, United States.
Louise HertsgaardTobacco Research Programs, University of Minnesota, Minneapolis, Minnesota, United States.
Joni JensenTobacco Research Programs, University of Minnesota, Minneapolis, Minnesota, United States.
Dorothy HatsukamiTobacco Research Programs, University of Minnesota, Minneapolis, Minnesota, United States.
Daniel R BrooksDepartment of Epidemiology, School of Public Health, Boston University, Boston, Massachusetts, United States.
George O'ConnorThe Pulmonary Center, Boston University School of Medicine, Boston, Massachusetts, United States.
Jennifer BeaneDepartment of Medicine, Section of Computational Biomedicine, Boston University School of Medicine, Boston, Massachusetts, United States.
Marc E LenburgDepartment of Medicine, Section of Computational Biomedicine, Boston University School of Medicine, Boston, Massachusetts, United States.
Avrum SpiraDepartment of Medicine, Section of Computational Biomedicine, Boston University School of Medicine, Boston, Massachusetts, United States. aspira@bu.edu.
Boston University · USUniversity of Minnesota · US

Funding

Tobacco Constituent and Biomarker Assessment CoreU19CA157345 · NCI · UNIVERSITY OF MINNESOTA · PI HATSUKAMI, DOROTHY K · 2012 to 2016
$13.3M
A non-invasive gene-expression biomarker of airway response to tobacco exposureU01ES016035 · NIEHS · BOSTON UNIVERSITY MEDICAL CAMPUS · PI SPIRA, AVRUM E · 2007 to 2010
$2.9M
Innovative Interventions for Smoking CessationR01DA025598 · NIDA · UNIVERSITY OF MINNESOTA · PI HATSUKAMI, DOROTHY K · 2009 to 2010
$924k
NCI NIH HHS U19 CA157345NIDA NIH HHS R01 DA025598NIEHS NIH HHS U01 ES016035
6 · The paper itself

Abstract

The physiologic response to tobacco smoke can be measured by gene-expression profiling of the airway epithelium. Temporal resolution of kinetics of gene-expression alterations upon smoking-cessation might delineate distinct biological processes that are activated during recovery from tobacco smoke exposure. Using whole genome gene-expression profiling of individuals initiating a smoking-cessation attempt, we sought to characterize the kinetics of gene-expression alterations in response to short-term smoking-cessation in the nasal epithelium. RNA was extracted from the nasal epithelial of active smokers at baseline and at 4, 8, 16, and 24-weeks after smoking-cessation and put onto Gene ST arrays. Gene-expression levels of 119 genes were associated with smoking-cessation (FDR < 0.05, FC ≥1.7) with a majority of the changes occurring by 8-weeks and a subset changing by 4-weeks. Genes down-regulated by 4- and 8-weeks post-smoking-cessation were involved in xenobiotic metabolism and anti-apoptotic functions respectively. These genes were enriched among genes previously found to be induced in smokers and following short-term in vitro exposure of airway epithelial cells to cigarette smoke (FDR < 0.05). Our findings suggest that the nasal epithelium can serve as a minimally-invasive tool to measure the reversible impact of smoking and broadly, may serve to assess the physiological impact of changes in smoking behavior.

Indexed as

Gene Expression ProfilingGenetic MarkersAdultBostonFemaleGene Expression RegulationHumansMaleMiddle AgedNasal MucosaRecovery of FunctionSmoking CessationTobacco SmokingGenetic Markers

Identifiers

PMID31061400
PMCPMC6502805
OpenAlexW2942992125

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.