Evidence map›Paper›PMID 31060584›Full record

ArticleParasites & vectors2019

Tissue-specific signatures in tick cell line MS profiles.

Dmitry S Loginov, Yana F Loginova, Filip Dycka, Katharina Böttinger, Pavlina Vechtova, Jan Sterba

Open access · goldAbstract readComparative Study
In one paragraph

Article in Parasites & vectors, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.7field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Interactions Between Ticks and Lyme Disease Spirochetes.Current issues in molecular biology · 2021
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Dmitry S LoginovFaculty of Science, University of South Bohemia, Branišovská 1760, 37005, Ceske Budejovice, Czech Republic. dloginov@jcu.cz.
Yana F LoginovaFaculty of Science, University of South Bohemia, Branišovská 1760, 37005, Ceske Budejovice, Czech Republic.
Filip DyckaFaculty of Science, University of South Bohemia, Branišovská 1760, 37005, Ceske Budejovice, Czech Republic.
Katharina BöttingerFaculty of Science, University of South Bohemia, Branišovská 1760, 37005, Ceske Budejovice, Czech Republic.
Pavlina VechtovaFaculty of Science, University of South Bohemia, Branišovská 1760, 37005, Ceske Budejovice, Czech Republic.
Jan SterbaFaculty of Science, University of South Bohemia, Branišovská 1760, 37005, Ceske Budejovice, Czech Republic.
Czech Academy of Sciences, Biology Centre · CZUniversity of South Bohemia in České Budějovice · CZInstitute of Biomedical Chemistry · RUInstitute of Parasitology · CZ

Funding

European Regional Development Fund Project CZ.02.1.01/0.0/0.0/15_003/0000441Grantová Agentura České Republiky (CZ) 18-27204SMinisterstvo Školství, Mládeže a Tělovýchovy LTARF 18021Ministry of Science and Higher Education of the Russian Federation 14.616.21.0094
6 · The paper itself

Abstract

backgroundThe availability of tick in vitro cell culture systems has facilitated many aspects of tick research, including proteomics. However, certain cell lines have shown a tissue-specific response to infection. Thus, a more thorough characterization of tick cell lines is necessary. Proteomic comparative studies of various tick cell lines will contribute to more efficient application of tick cell lines as model systems for investigation of host-vector-pathogen interactions.

resultsThree cell lines obtained from a hard tick, Ixodes ricinus, and two from I. scapularis were investigated. A cell mass spectrometry approach (MALDI-TOF MS) was applied, as well as classical proteomic workflows. Using PCA, tick cell line MS profiles were grouped into three clusters comprising IRE/CTVM19 and ISE18, IRE11 and IRE/CTVM20, and ISE6 cell lines. Two other approaches confirmed the results of PCA: in-solution digestion followed by nanoLC-ESI-Q-TOF MS/MS and 2D electrophoresis. The comparison of MS spectra of the cell lines and I. ricinus tick organs revealed 29 shared peaks. Of these, five were specific for ovaries, three each for gut and salivary glands, and one for Malpighian tubules. For the first time, characteristic peaks in MS profiles of tick cell lines were assigned to proteins identified in acidic extracts of corresponding cell lines.

conclusionsSeveral organ-specific MS signals were revealed in the profiles of tick cell lines.

Indexed as

Cell LineSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationAnimalsElectrophoresis, Gel, Two-DimensionalFemaleInsect ProteinsIxodesProteomicsSalivary GlandsTandem Mass SpectrometryInsect ProteinsBiotypingMALDI-TOF MSTickTick cell lineTick organs

Identifiers

PMID31060584
PMCPMC6503378
OpenAlexW2947263281

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.