Evidence map›Paper›PMID 31060508›Full record

ArticleBMC genomics2019

Genetic mechanism underlying sexual plasticity and its association with colour patterning in zebrafish (Danio rerio).

Shahrbanou Hosseini, Ngoc-Thuy Ha, Henner Simianer, Clemens Falker-Gieske, Bertram Brenig, Andre Franke, Gabriele Hörstgen-Schwark, Jens Tetens, Sebastian Herzog, Ahmad Reza Sharifi

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 25 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Shahrbanou HosseiniDepartment of Animal Sciences, University of Goettingen, Goettingen, Germany. Shahrbanou.Hosseini@uni-goettingen.de.ORCID http://orcid.org/0000-0003-2826-8394
Ngoc-Thuy HaDepartment of Animal Sciences, University of Goettingen, Goettingen, Germany.
Henner SimianerDepartment of Animal Sciences, University of Goettingen, Goettingen, Germany.
Clemens Falker-GieskeDepartment of Animal Sciences, University of Goettingen, Goettingen, Germany.
Bertram BrenigDepartment of Animal Sciences, University of Goettingen, Goettingen, Germany.
Andre FrankeInstitute of Clinical Molecular Biology, Christian-Albrechts-University, Kiel, Germany.
Gabriele Hörstgen-SchwarkDepartment of Animal Sciences, University of Goettingen, Goettingen, Germany.
Jens TetensDepartment of Animal Sciences, University of Goettingen, Goettingen, Germany.
Sebastian HerzogMax Planck Institute for Dynamics and Self-Organization, Goettingen, Germany.
Ahmad Reza SharifiDepartment of Animal Sciences, University of Goettingen, Goettingen, Germany.
University of Göttingen · DEMax Planck Institute for Dynamics and Self-Organization · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundElevated water temperature, as is expected through climate change, leads to masculinization in fish species with sexual plasticity, resulting in changes in population dynamics. These changes are one important ecological consequence, contributing to the risk of extinction in small and inbred fish populations under natural conditions, due to male-biased sex ratio. Here we investigated the effect of elevated water temperature during embryogenesis on sex ratio and sex-biased gene expression profiles between two different tissues, namely gonad and caudal fin of adult zebrafish males and females, to gain new insights into the molecular mechanisms underlying sex determination (SD) and colour patterning related to sexual attractiveness.

resultsOur study demonstrated sex ratio imbalances with 25.5% more males under high-temperature condition, resulting from gonadal masculinization. The result of transcriptome analysis showed a significantly upregulated expression of male SD genes (e.g. dmrt1, amh, cyp11c1 and sept8b) and downregulation of female SD genes (e.g. zp2.1, vtg1, cyp19a1a and bmp15) in male gonads compared to female gonads. Contrary to expectations, we found highly differential expression of colour pattern (CP) genes in the gonads, suggesting the 'neofunctionalisation' of those genes in the zebrafish reproduction system. However, in the caudal fin, no differential expression of CP genes was identified, suggesting the observed differences in colouration between males and females in adult fish may be due to post-transcriptional regulation of key enzymes involved in pigment synthesis and distribution.

conclusionsOur study demonstrates male-biased sex ratio under high temperature condition and support a polygenic SD (PSD) system in laboratory zebrafish. We identify a subset of pathways (tight junction, gap junction and apoptosis), enriched for SD and CP genes, which appear to be co-regulated in the same pathway, providing evidence for involvement of those genes in the regulation of phenotypic sexual dimorphism in zebrafish.

Indexed as

Gene Expression Regulation, DevelopmentalSex DifferentiationSex RatioAnimalsColorFemaleGonadsHot TemperatureMaleSexual MaturationTranscriptomeZebrafishZebrafish ProteinsZebrafish ProteinsColour patternEmbryogenesisMasculinizationSex determinationSex ratioTemperatureTranscriptome analysisZebrafish

Identifiers

PMID31060508
PMCPMC6503382
OpenAlexW2947525971

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.