Evidence map›Paper›PMID 31059532›Full record

ArticlePloS one2019

Anomalous diffusion for neuronal growth on surfaces with controlled geometries.

Ilya Yurchenko, Joao Marcos Vensi Basso, Vladyslav Serhiiovych Syrotenko, Cristian Staii

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.5field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
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  9. Mathematical models of neuronal growth.Biomechanics and modeling in mechanobiology · 2022
    Review
  10. Article
  11. Article
  12. Article
  13. Variations of Elastic Modulus and Cell Volume with Temperature for Cortical Neurons.Langmuir : the ACS journal of surfaces and colloids · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Ilya YurchenkoDepartment of Physics and Astronomy, Center for Nanoscopic Physics, Tufts University, Medford, Massachusetts, United States of America.
Joao Marcos Vensi BassoDepartment of Physics and Astronomy, Center for Nanoscopic Physics, Tufts University, Medford, Massachusetts, United States of America.
Vladyslav Serhiiovych SyrotenkoDepartment of Physics and Astronomy, Center for Nanoscopic Physics, Tufts University, Medford, Massachusetts, United States of America.
Cristian StaiiDepartment of Physics and Astronomy, Center for Nanoscopic Physics, Tufts University, Medford, Massachusetts, United States of America.ORCID 0000-0002-9771-8400
Tufts University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Geometrical cues are known to play a very important role in neuronal growth and the formation of neuronal networks. Here, we present a detailed analysis of axonal growth and dynamics for neuronal cells cultured on patterned polydimethylsiloxane surfaces. We use fluorescence microscopy to image neurons, quantify their dynamics, and demonstrate that the substrate geometrical patterns cause strong directional alignment of axons. We quantify axonal growth and report a general stochastic approach that quantitatively describes the motion of growth cones. The growth cone dynamics is described by Langevin and Fokker-Planck equations with both deterministic and stochastic contributions. We show that the deterministic terms contain both the angular and speed dependence of axonal growth, and that these two contributions can be separated. Growth alignment is determined by surface geometry, and it is quantified by the deterministic part of the Langevin equation. We combine experimental data with theoretical analysis to measure the key parameters of the growth cone motion: speed and angular distributions, correlation functions, diffusion coefficients, characteristics speeds and damping coefficients. We demonstrate that axonal dynamics displays a cross-over from Brownian motion (Ornstein-Uhlenbeck process) at earlier times to anomalous dynamics (superdiffusion) at later times. The superdiffusive regime is characterized by non-Gaussian speed distributions and power law dependence of the axonal mean square length and the velocity correlation functions. These results demonstrate the importance of geometrical cues in guiding axonal growth, and could lead to new methods for bioengineering novel substrates for controlling neuronal growth and regeneration.

Indexed as

AnimalsAxonsDimethylpolysiloxanesGrowth ConesMicroscopy, Atomic ForceMicroscopy, FluorescenceNeuronsRatsStochastic ProcessesDimethylpolysiloxanes

Identifiers

PMID31059532
PMCPMC6502317
OpenAlexW2944129696

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.