Evidence map›Paper›PMID 31059516›Full record

ArticlePLoS neglected tropical diseases2019

PCR-RFLP analyses of Leishmania species causing cutaneous and mucocutaneous leishmaniasis revealed distribution of genetically complex strains with hybrid and mito-nuclear discordance in Ecuador.

Hirotomo Kato, Eduardo A Gomez, Chisato Seki, Hayato Furumoto, Luiggi Martini-Robles, Jenny Muzzio, Manuel Calvopiña, Lenin Velez, Makoto Kubo, Ahmed Tabbabi and 2 more

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
6.7field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 45 citations in OpenAlex.

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  9. Molecular-based detection ofJournal of parasitic diseases : official organ of the Indian Society for Parasitology · 2022
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  15. Identification ofJournal of parasitic diseases : official organ of the Indian Society for Parasitology · 2021
    Article
  16. Article
  17. Article
  18. Article
  19. Prevalence of Genetically ComplexFrontiers in cellular and infection microbiology · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 2 countries.

Hirotomo KatoDivision of Medical Zoology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan.ORCID 0000-0001-5429-9536
Eduardo A GomezDepartamento de Parasitologia y Medicina Tropical, Facultad de Ciencias Medicas, Universidad Catolica de Santiago de Guayaquil, Guayaquil, Ecuador.
Chisato SekiDivision of Medical Zoology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan.
Hayato FurumotoLaboratory of Parasitology, Department of Disease Control, Graduate School of Veterinary Medicine, Hokkaido University, Hokkaido, Japan.
Luiggi Martini-RoblesHospital de Especialidades Guayaquil "Dr. Abel Gilberto Pinton", Ministerio de Salud Publica, Guayaquil, Ecuador.
Jenny MuzzioDepartamento de Parasitologia, Insitituto de Investigacion de Salud Publica, Guayaquil, Ecuador.ORCID 0000-0002-2972-4833
Manuel CalvopiñaEscuela de Medicina, Facultad de Ciencias de la Salud, Universidad De Las Américas (UDLA), Quito, Ecuador.
Lenin VelezDepartamento de Parasitologia y Medicina Tropical, Facultad de Ciencias Medicas, Universidad Catolica de Santiago de Guayaquil, Guayaquil, Ecuador.
Makoto KuboDivision of Immunology, Kitasato University School of Allied Health Sciences, Kanagawa, Japan.
Ahmed TabbabiDivision of Medical Zoology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan.
Daisuke S YamamotoDivision of Medical Zoology, Department of Infection and Immunity, Jichi Medical University, Tochigi, Japan.
Yoshihisa HashiguchiDepartamento de Parasitologia y Medicina Tropical, Facultad de Ciencias Medicas, Universidad Catolica de Santiago de Guayaquil, Guayaquil, Ecuador.
Jichi Medical University · JPUniversidad Católica de Santiago de Guayaquil · ECHokkaido University · JPInstituto Nacional de Investigación en Salud Pública · ECKitasato University · JPMinisterio de Salud Pública · ECUniversidad de Las Américas · EC

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PCR-Restriction Fragment Length Polymorphism (RFLP) analyses targeting multiple nuclear genes were established for the simple and practical identification of Leishmania species without using expensive equipment. This method was applied to 92 clinical samples collected at 33 sites in 14 provinces of Ecuador, which have been identified at the species level by the kinetoplast cytochrome b (cyt b) gene sequence analysis, and the results obtained by the two analyses were compared. Although most results corresponded between the two analyses, PCR-RFLP analyses revealed distribution of hybrid strains between Leishmania (Viannia) guyanensis and L. (V.) braziliensis and between L. (V.) guyanensis and L. (V.) panamensis, of which the latter was firstly identified in Ecuador. Moreover, unexpected parasite strains having the kinetoplast cyt b gene of L. (V.) braziliensis and nuclear genes of L. (V.) guyanensis, L. (V.) panamensis, or a hybrid between L. (V.) guyanensis and L. (V.) panamensis were identified. This is the first report of the distribution of a protozoan parasite having mismatches between kinetoplast and nuclear genes, known as mito-nuclear discordance. The result demonstrated that genetically complex Leishmania strains are present in Ecuador. Since genetic exchanges such as hybrid formation were suggested to cause higher pathogenicity in Leishmania and may be transmitted by more species of sand flies, further country-wide epidemiological studies on clinical symptoms, as well as transmissible vectors, will be necessary.

Indexed as

AnimalsBase Pair MismatchCell NucleusDNA, KinetoplastEcuadorHumansLeishmaniaLeishmaniasis, CutaneousLeishmaniasis, MucocutaneousMitochondriaPolymerase Chain ReactionPolymorphism, Restriction Fragment LengthProtozoan ProteinsPsychodidaeDNA, KinetoplastProtozoan Proteins

Identifiers

PMID31059516
PMCPMC6522058
OpenAlexW2944551448

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.