Evidence map›Paper›PMID 31057183›Full record

ArticleJournal of physics D: Applied physics2019

All-optical crosstalk-free manipulation and readout of Chronos-expressing neurons.

Navjeevan S Soor, Peter Quicke, Carmel L Howe, Kuin T Pang, Mark A A Neil, Simon R Schultz, Amanda J Foust

Open access · hybridAbstract read
In one paragraph

Article in Journal of physics D: Applied physics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.5field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Model-Based Explainable Deep Learning for Light-Field Microscopy Imaging.IEEE transactions on image processing : a publication of the IEEE Signal Processing Society · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Navjeevan S SoorCentre for Neurotechnology, Imperial College London, London, United Kingdom.ORCID 0000-0003-4304-8904
Peter QuickeCentre for Neurotechnology, Imperial College London, London, United Kingdom.ORCID 0000-0003-2289-6672
Carmel L HoweCentre for Neurotechnology, Imperial College London, London, United Kingdom.ORCID 0000-0002-5827-8705
Kuin T PangDepartment of Bioengineering, Imperial College London, London, United Kingdom.
Mark A A NeilDepartment of Physics, Blackett Laboratory, Imperial College London, London, United Kingdom.
Simon R SchultzCentre for Neurotechnology, Imperial College London, London, United Kingdom.ORCID 0000-0002-6794-5813
Amanda J FoustCentre for Neurotechnology, Imperial College London, London, United Kingdom.ORCID 0000-0002-4895-0502
London Centre for Nanotechnology · GBAgency for Science, Technology and Research · SGImperial College London · GB

Funding

Three Dimensional Holography for Parallel Multi-target Optogenetic Circuit ManipulationU01NS090501 · NINDS · PIERRE AND MARIE CURIE UNIVERSITY · PI EMILIANI, VALENTINA, PICAUD, SERGE · 2014 to 2016
$941k
NINDS NIH HHS U01 NS090501Wellcome Trust
6 · The paper itself

Abstract

All optical neurophysiology allows manipulation and readout of neural network activity with single-cell spatial resolution and millisecond temporal resolution. Neurons can be made to express proteins that actuate transmembrane currents upon light absorption, enabling optical control of membrane potential and action potential signalling. In addition, neurons can be genetically or synthetically labelled with fluorescent reporters of changes in intracellular calcium concentration or membrane potential. Thus, to optically manipulate and readout neural activity in parallel, two spectra are involved: the action spectrum of the actuator, and the absorption spectrum of the fluorescent reporter. Due to overlap in these spectra, previous all-optical neurophysiology paradigms have been hindered by spurious activation of neuronal activity caused by the readout light. Here, we pair the blue-green absorbing optogenetic actuator, Chronos, with a deep red-emitting fluorescent calcium reporter CaSiR-1. We show that cultured Chinese hamster ovary cells transfected with Chronos do not exhibit transmembrane currents when illuminated with wavelengths and intensities suitable for exciting one-photon CaSiR-1 fluorescence. We then demonstrate crosstalk-free, high signal-to-noise ratio CaSiR-1 red fluorescence imaging at 100 frames s

Indexed as

calcium indicatorChronoscrosstalkfunctional imagingneuromodulationneuronoptogenetics

Identifiers

PMID31057183
PMCPMC6466639
OpenAlexW2904178747

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.