Evidence map›Paper›PMID 31055674›Full record

ArticleGenetica2019

Molecular characterization of class I histone deacetylases and their expression in response to thermal and oxidative stresses in the red flour beetle, Tribolium castaneum.

Minxuan Chen, Nan Zhang, Heng Jiang, Xiangkun Meng, Kun Qian, Jianjun Wang

Abstract read
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In one paragraph

Article in Genetica, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Minxuan ChenCollege of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China.
Nan ZhangCollege of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China.
Heng JiangCollege of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China.
Xiangkun MengCollege of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China.
Kun QianCollege of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China.
Jianjun WangCollege of Horticulture and Plant Protection, Yangzhou University, Yangzhou, 225009, China. wangjj@yzu.edu.cn.ORCID http://orcid.org/0000-0001-9113-7894

Funding

National Natural Science Foundation of China 31572000National Natural Science Foundation of China 31871974
6 · The paper itself

Abstract

Reversible acetylation of core histones plays an important role in the epigenetic regulation of gene transcription, and is controlled by the action of histone acetyltransferases (HATs) and histone deacetylases (HDACs). While HDACs have been well studied in Drosophila melanogaster, information from insect pests is still limited. In the current study, we cloned and characterized three class I enzymes, TcHDAC1, TcHDAC 3 and TcHDAC 8, in the red flour beetle, Tribolium castaneum. Expression profiling showed that T. castaneum HDAC genes are expressed in all developmental stages and tissues examined. A dramatic increase of mRNA expression level was observed from prepupae to 1-day-old pupae for all three T. castaneum HDAC genes. Both TcHDAC1 and TcHDAC3 exhibited the highest mRNA expression levels in thorax, whereas TcHDAC8 was highly expressed in fat body. Furthermore, T. castaneum HDAC genes were found to respond to heat, cold and oxidative stresses. While the heat-stress treatment decreased the mRNA expression levels of T. castaneum HDAC genes, their transcripts were induced by paraquat treatment. These results suggest a possible role for class I HDAC genes in the epigenetic regulation of T. castaneum development and stress responses.

Indexed as

AnimalsCold TemperatureGene Expression Regulation, DevelopmentalHistone Deacetylase 1Histone Deacetylase 3Histone DeacetylasesHot TemperatureOrgan SpecificityOxidative StressParaquatPupaTriboliumHistone Deacetylase 1Histone Deacetylase 3Histone DeacetylasesParaquatHistone deacetylasesmRNA expressionRT-qPCRStress responseTribolium castaneum

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.