Evidence map›Paper›PMID 31053138›Full record

ArticleBMC veterinary research2019

Two novel amino acid substitutions in highly conserved regions of prion protein (PrP) and a high frequency of a scrapie protective variant in native Ethiopian goats.

Maria Vitale, Sergio Migliore, Berhanu Tilahun, Mukarim Abdurahaman, Marco Tolone, Ignazio Sammarco, Vincenzo Di Marco Lo Presti, Endrias Zewdu Gebremedhin

Open access · goldAbstract read
In one paragraph

Article in BMC veterinary research, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Genetic Variation in the Prion Protein Gene (Animals : an open access journal from MDPI · 2021
    Article
  5. Animals : an open access journal from MDPI · 2021
    Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 5 institutions in 2 countries.

Maria VitaleIstituto Zooprofilattico Sperimentale of Sicily, Laboratory of Genetics of Microorganisms, Via Gino Marinuzzi 3, 90129, Palermo, Italy. marvitus@yahoo.com.ORCID http://orcid.org/0000-0003-2084-2718
Sergio MiglioreIstituto Zooprofilattico Sperimentale of Sicily, Laboratory of Genetics of Microorganisms, Via Gino Marinuzzi 3, 90129, Palermo, Italy.
Berhanu TilahunDepartment of Parasitology, Haramaya University, College of Veterinary Medicine, P.O. Box 138, Dire Dawa, Ethiopia.
Mukarim AbdurahamanJimma University, School of Veterinary Medicine, P.O. Box 307, Jimma, Ethiopia.
Marco ToloneDipartimento Scienze Agrarie, Alimentari e Forestali, Università degli Studi di Palermo, Viale delle Scienze, 90128, Palermo, Italy.
Ignazio SammarcoIstituto Zooprofilattico Sperimentale of Sicily, Laboratory of Genetics of Microorganisms, Via Gino Marinuzzi 3, 90129, Palermo, Italy.
Vincenzo Di Marco Lo PrestiIstituto Zooprofilattico Sperimentale of Sicily, Laboratory of Genetics of Microorganisms, Via Gino Marinuzzi 3, 90129, Palermo, Italy.
Endrias Zewdu GebremedhinDepartment of Veterinary Science, Ambo University, College of Agriculture and Veterinary Sciences, P.O. Box 19, Ambo, Ethiopia.
Istituto Zooprofilattico Sperimentale Della Sicilia · ITAmbo University · ETHaramaya University · ETJimma University · ETUniversity of Palermo · IT

Funding

Ministero della Salute EMIDA goat TSE freeMinistero della Salute IZSSi08/16 RCMinistero della Salute Ricerca Finalizzata project code RF-2010-2318525
6 · The paper itself

Abstract

backgroundPolymorphisms of the prion protein gene may influence scrapie susceptibility in small ruminants through modified protein conformation. At least 47 amino acid substitutions and 19 silent polymorphisms have been described in goat PRNP reported from several countries. The objective of this study was to investigate PRNP polymorphisms of native Ethiopian goat breeds and compare the results with other goat breeds.

resultsThe analysis of the prion protein gene PRNP in 229 goats belonging to three of the main Ethiopian native goat breeds showed a remarkably high frequency (> 34.6%) of p.(Asn146Ser) in these breeds, a variant involved in scrapie resistance in Cyprus. In addition, two novel amino-acid substitutions p.(Gly127Ala) and p.(Thr193Ile), with frequencies ranging from 1.5 to 7.3% were detected. Both amino acids are well conserved in prion proteins (PrP) of most species and these changes have never been reported before in goats worldwide. Residue 127 is within the N-terminal domain of PrP and is probably involved in the recruitment of neural cell adhesion molecules (NCAM). Residue 193 is within the highly conserved string of 4 threonines that plays a role in determining the efficiency of prion protein conversion towards its pathological form.

conclusionTwo novel coding polymorphisms and a high frequency of a scrapie protective variant indicate a high level of genetic diversity in PRNP of Ethiopian goats. This finding increases the interest in exploring PRNP polymorphisms of native goat breeds in areas where cross breeding with foreign goats has rarely occurred.

Indexed as

Genetic Predisposition to DiseaseGenotypePolymorphism, GeneticAmino Acid SubstitutionAnimalsEthiopiaGoat DiseasesGoatsPrion ProteinsScrapiePrion ProteinsEthiopian native goats; novel polymorphismsPRNPPrPScrapie

Identifiers

PMID31053138
PMCPMC6500044
OpenAlexW2947936710

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.