Evidence map›Paper›PMID 31052161›Full record

ArticleGenes2019

Genome-Wide Investigation and Functional Analysis of

Zishuai Wang, Xikang Feng, Zhonglin Tang, Shuai Cheng Li

Erratum issuedAbstract read
In one paragraph

Article in Genes, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Zishuai WangDepartment of Computer Science, City University of Hong Kong, Kowloon, Hong Kong, China. zishuwang2-c@my.cityu.edu.hk.
Xikang FengDepartment of Computer Science, City University of Hong Kong, Kowloon, Hong Kong, China. xikanfeng2-c@my.cityu.edu.hk.ORCID 0000-0003-4029-3795
Zhonglin TangDepartment of Pig Genomic Design and Breeding, Agricultural Genome Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518124, China. tangzhonglin@caas.cn.
Shuai Cheng LiDepartment of Computer Science, City University of Hong Kong, Kowloon, Hong Kong, China. shuaicli@cityu.edu.hk.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recently, the prevalence and importance of RNA editing have been illuminated in mammals. However, studies on RNA editing of pigs, a widely used biomedical model animal, are rare. Here we collected RNA sequencing data across 11 tissues and identified more than 490,000 RNA editing sites. We annotated their biological features, detected flank sequence characteristics of A-to-I editing sites and the impact of A-to-I editing on miRNA-mRNA interactions, and identified RNA editing quantitative trait loci (edQTL).

Indexed as

AnimalsGenomeIntronsMicroRNAsNucleotide MotifsOpen Reading FramesQuantitative Trait LociRNA EditingRNA, MessengerSwineTissue DistributionMicroRNAsRNA, Messengercomprehensive analysisdatabasepigRNA editingtissues

Identifiers

PMID31052161
PMCPMC6562383

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.