Evidence map›Paper›PMID 31051160›Full record

ArticleDevelopmental biology2019

Cyclic AMP induction of Dictyostelium prespore gene expression requires autophagy.

Yoko Yamada, Pauline Schaap

Open access · hybridAbstract read
In one paragraph

Article in Developmental biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 25 citations in OpenAlex.

  1. Guideline
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Autophagy in the Neuronal Ceroid Lipofuscinoses (Batten Disease).Frontiers in cell and developmental biology · 2022
    Review
  9. Review
  10. Article
  11. Article
  12. TheFrontiers in cell and developmental biology · 2021
    Review
  13. Loss of PIKfyve Causes Transdifferentiation ofFrontiers in cell and developmental biology · 2021
    Article
  14. Aberrant Autophagy Impacts Growth and Multicellular Development in aFrontiers in cell and developmental biology · 2021
    Article
  15. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Yoko YamadaSchool of Life Sciences, University of Dundee, DD15EH, Dundee, UK.
Pauline SchaapSchool of Life Sciences, University of Dundee, DD15EH, Dundee, UK. Electronic address: p.schaap@dundee.ac.uk.
University of Dundee · GB

Funding

Wellcome TrustWellcome Trust 100293/Z/12/Z
6 · The paper itself

Abstract

Dictyostelium discoideum amoebas display colonial multicellularity where starving amoebas aggregate to form migrating slugs and fruiting bodies consisting of spores and three supporting cell types. To resolve the cell signalling mechanism that control sporulation, we use insertional mutagenesis of amoebas transformed with fusion constructs of spore genes and red fluorescent protein. We identified the defective gene in a mutant lacking spore gene expression as the autophagy gene Atg7. Directed knock-out of atg7 and of autophagy genes like atg5 and atg9 yielded a similar phenotype, with lack of viable spores and excessive differentiation of stalk cells. The atg7-, atg5- and atg9- cells were specifically defective in cAMP induction of prespore genes, but showed enhanced cAMP stimulation of prestalk genes at the same developmental stage. The lack of prespore gene induction in the autophagy mutants was not due to deleterious effects of loss of autophagy on known components of the cAMP pathway, such as cAMP receptors and their cAMP-induced phosphorylation and internalization, PKA and the transcription factors SpaA and GbfA, or to lack of NH

Indexed as

Gene Expression Regulation, DevelopmentalAmmoniaAutophagyAutophagy-Related Protein 7BiomarkersCell DifferentiationCyclic AMPCyclic AMP-Dependent Protein KinasesDictyosteliumEndocytosisGenes, ProtozoanMutagenesisMutationPhenotypePhosphorylationSporesAmmoniaAutophagy-Related Protein 7BiomarkersCyclic AMPCyclic AMP-Dependent Protein KinasesTranscription Factorsatg5atg7atg9AutophagycAMP receptorsCell-type specializationSporulation

Identifiers

PMID31051160
PMCPMC6598861
OpenAlexW2943375520

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.