Evidence map›Paper›PMID 31050164›Full record

ArticleAmerican journal of medical genetics. Part A2019

Expansions and contractions of the FMR1 CGG repeat in 5,508 transmissions of normal, intermediate, and premutation alleles.

Sarah L Nolin, Anne Glicksman, Nicole Tortora, Emily Allen, James Macpherson, Montserrat Mila, Angela M Vianna-Morgante, Stephanie L Sherman, Carl Dobkin, Gary J Latham and 1 more

Abstract read
In one paragraph

Article in American journal of medical genetics. Part A, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 43 papers.

0numbers the graph read from it
0cells of the map it votes in
43citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

43 citing papers in PubMed.

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  7. Beyond Repetition: The Role of Gray Zone Alleles in the Upregulation ofInternational journal of molecular sciences · 2025
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  10. Cells · 2024
    Review
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  13. Review
  14. Review
  15. Article
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  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Sarah L NolinDepartment of Human Genetics, New York State Institute for Basic Research in Developmental Disabilities, Staten Island, New York.ORCID 0000-0001-5209-289X
Anne GlicksmanDepartment of Human Genetics, New York State Institute for Basic Research in Developmental Disabilities, Staten Island, New York.
Nicole TortoraDepartment of Human Genetics, New York State Institute for Basic Research in Developmental Disabilities, Staten Island, New York.
Emily AllenDepartment of Human Genetics, Emory University School of Medicine, Atlanta, Georgia.
James MacphersonWessex Regional Genetics Laboratory, Salisbury NHS District Hospital, Salisbury, United Kingdom.
Montserrat MilaBiochemical and Molecular Genetics, Hospital Clinic de Barcelona, IDIBAPS and CIBERER, Barcelona, Spain.ORCID 0000-0002-7906-0916
Angela M Vianna-MorganteDepartment of Genetics and Evolutionary Biology, Institute of Biosciences, Universidade de São Paulo, São Paulo, Brazil.
Stephanie L ShermanDepartment of Human Genetics, Emory University School of Medicine, Atlanta, Georgia.
Carl DobkinDepartment of Human Genetics, New York State Institute for Basic Research in Developmental Disabilities, Staten Island, New York.
Gary J LathamAsuragen, Inc., Austin, Texas.
Andrew G HaddAsuragen, Inc., Austin, Texas.

Funding

New York State Institute for Basic Research in Developmental DisabilitiesNew York State Office for People with Developmental Disabilities
6 · The paper itself

Abstract

Instability of the FMR1 repeat, commonly observed in transmissions of premutation alleles (55-200 repeats), is influenced by the size of the repeat, its internal structure and the sex of the transmitting parent. We assessed these three factors in unstable transmissions of 14/3,335 normal (~5 to 44 repeats), 54/293 intermediate (45-54 repeats), and 1561/1,880 premutation alleles. While most unstable transmissions led to expansions, contractions to smaller repeats were observed in all size classes. For normal alleles, instability was more frequent in paternal transmissions and in alleles with long 3' uninterrupted repeat lengths. For premutation alleles, contractions also occurred more often in paternal than maternal transmissions and the frequency of paternal contractions increased linearly with repeat size. All paternal premutation allele contractions were transmitted as premutation alleles, but maternal premutation allele contractions were transmitted as premutation, intermediate, or normal alleles. The eight losses of AGG interruptions in the FMR1 repeat occurred exclusively in contractions of maternal premutation alleles. We propose a refined model of FMR1 repeat progression from normal to premutation size and suggest that most normal alleles without AGG interruptions are derived from contractions of maternal premutation alleles.

Indexed as

AllelesInheritance PatternsTrinucleotide Repeat ExpansionFemaleFragile X Messenger Ribonucleoprotein 1Fragile X SyndromeGene ExpressionGene FrequencyHumansMalePedigreeFMR1 protein, humanFragile X Messenger Ribonucleoprotein 1FMR1fragile Xtrinucleotide repeat instability

Identifiers

PMID31050164
PMCPMC6619443

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.