Evidence map›Paper›PMID 31049583›Full record

ArticleCardiovascular research2020

Genome-wide association study identifies locus at chromosome 2q32.1 associated with syncope and collapse.

Katra Hadji-Turdeghal, Laura Andreasen, Christian M Hagen, Gustav Ahlberg, Jonas Ghouse, Marie Bækvad-Hansen, Jonas Bybjerg-Grauholm, David M Hougaard, Paula Hedley, Stig Haunsø and 6 more

Abstract read
In one paragraph

Article in Cardiovascular research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Article
  2. Towards Understanding the Genetic Nature of Vasovagal Syncope.International journal of molecular sciences · 2021
    Review
  3. Atrial fibrillation-a complex polygenetic disease.European journal of human genetics : EJHG · 2021
    Review
  4. Article
  5. Article
  6. Review
  7. The Search for the Genes of Vasovagal Syncope.Frontiers in cardiovascular medicine · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Katra Hadji-TurdeghalLaboratory for Molecular Cardiology, Department of Cardiology, The Heart Centre, Rigshospitalet (Copenhagen University Hospital), Copenhagen, Denmark.
Laura AndreasenLaboratory for Molecular Cardiology, Department of Cardiology, The Heart Centre, Rigshospitalet (Copenhagen University Hospital), Copenhagen, Denmark.
Christian M HagenDepartment of Congenital Disorders, Statens Serum Institute, Copenhagen, Denmark.
Gustav AhlbergLaboratory for Molecular Cardiology, Department of Cardiology, The Heart Centre, Rigshospitalet (Copenhagen University Hospital), Copenhagen, Denmark.
Jonas GhouseLaboratory for Molecular Cardiology, Department of Cardiology, The Heart Centre, Rigshospitalet (Copenhagen University Hospital), Copenhagen, Denmark.
Marie Bækvad-HansenDepartment of Congenital Disorders, Statens Serum Institute, Copenhagen, Denmark.
Jonas Bybjerg-GrauholmDepartment of Congenital Disorders, Statens Serum Institute, Copenhagen, Denmark.
David M HougaardDepartment of Congenital Disorders, Statens Serum Institute, Copenhagen, Denmark.
Paula HedleyDepartment of Congenital Disorders, Statens Serum Institute, Copenhagen, Denmark.
Stig HaunsøLaboratory for Molecular Cardiology, Department of Cardiology, The Heart Centre, Rigshospitalet (Copenhagen University Hospital), Copenhagen, Denmark.
Jesper H SvendsenLaboratory for Molecular Cardiology, Department of Cardiology, The Heart Centre, Rigshospitalet (Copenhagen University Hospital), Copenhagen, Denmark.
Jørgen K KantersLaboratory of Experimental Cardiology, Department of Biomedical Sciences, University of Copenhagen, Copenhagen, Denmark.
Thomas A JeppsDepartment of Biomedical Sciences, University of Copenhagen, Copenhagen, Denmark.
Morten W SkovLaboratory for Molecular Cardiology, Department of Cardiology, The Heart Centre, Rigshospitalet (Copenhagen University Hospital), Copenhagen, Denmark.
Michael ChristiansenDepartment of Congenital Disorders, Statens Serum Institute, Copenhagen, Denmark.
Morten S OlesenLaboratory for Molecular Cardiology, Department of Cardiology, The Heart Centre, Rigshospitalet (Copenhagen University Hospital), Copenhagen, Denmark.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimsSyncope is a common condition associated with frequent hospitalization or visits to the emergency department. Family aggregation and twin studies have shown that syncope has a heritable component. We investigated whether common genetic variants predispose to syncope and collapse. METHODS AND

resultsWe used genome-wide association data on syncope on 408 961 individuals with European ancestry from the UK Biobank study. In a replication study, we used the Integrative Psychiatric Research Consortium (iPSYCH) cohort (n = 86 189), to investigate the risk of incident syncope stratified by genotype carrier status. We report on a genome-wide significant locus located on chromosome 2q32.1 [odds ratio = 1.13, 95% confidence interval (CI) 1.10-1.17, P = 5.8 × 10-15], with lead single nucleotide polymorphism rs12465214 in proximity to the gene zinc finger protein 804a (ZNF804A). This association was also shown in the iPSYCH cohort, where homozygous carriers of the C allele conferred an increased hazard ratio (1.30, 95% CI 1.15-1.46, P = 1.68 × 10-5) of incident syncope. Quantitative polymerase chain reaction analysis showed ZNF804A to be expressed most abundantly in brain tissue.

conclusionWe identified a genome-wide significant locus (rs12465214) associated with syncope and collapse. The association was replicated in an independent cohort. This is the first genome-wide association study to associate a locus with syncope and collapse.

Indexed as

Chromosomes, Human, Pair 2Polymorphism, Single NucleotideQuantitative Trait LociAdolescentAdultAgedCase-Control StudiesCell LineDatabases, FactualDenmarkFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyHeredityHumansIncidenceKruppel-Like Transcription FactorsZNF804A protein, humanGeneticGenome-wide association studySyncope

Identifiers

PMID31049583
PMCPMC6918066

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.