ArticleGigaScience2019
The genomes of pecan and Chinese hickory provide insights into Carya evolution and nut nutrition.
Article in GigaScience, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.
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Who cites it
64 citing papers in PubMed, 139 citations in OpenAlex.
- A haplotype-resolved, chromosome-scale genome assembly and annotation for Carya glabra (pignut hickory; Juglandaceae).G3 (Bethesda, Md.) · 2026Article
- Using reciprocally retained gene families to detect whole-genome multiplications in plants.Genome biology · 2026Article
- Molecular mechanisms driving the success of grafting impacted by walnut rootstock.BMC genomics · 2026Article
- Article
- Beyond the kernel: integrative phytochemical profiling and metabolic synergy ofFrontiers in nutrition · 2026Review
- Genome-wide identification of NF-Y family in Carya illinoinensis and CiNF-YC6 role in fatty acid biosynthesis.Plant cell reports · 2025Article
- Article
- Stress Regulatory capabilities discovered in late embryogenesis abundant (LEA) proteins expressed during pecan (Carya illinoinensis) kernel development.BMC genomics · 2025Article
- JsSAMDC promotes polyamine synthesis and flowering genes to synergistically regulate female flower bud differentiation.Plant cell reports · 2025Article
- Mechanisms of Chinese Hickory Resistance to Dry Rot Disease byPlants (Basel, Switzerland) · 2025Article
- Combined transcriptional and metabolomic analysis of flavonoids in the regulation of female flower bud differentiation in Juglans sigillata Dode.BMC plant biology · 2025Article
- DEFGermplasm: a comprehensive digital platform for forest genomic and phenotype data integration.Forestry research · 2025Article
- Salt stress alters the selectivity of mature pecan for the rhizosphere community and its associated functional traits.Frontiers in plant science · 2025Article
- Assembly and analysis of the complete mitochondrial genome of Carya illinoinensis to provide insights into the conserved sequences of tRNA genes.Scientific reports · 2024Article
- Infection mechanism of Botryosphaeria dothidea and the disease resistance strategies of Chinese hickory (Carya cathayensis).BMC plant biology · 2024Article
- The Integrated Analysis of miRNome and Degradome Sequencing Reveals the Regulatory Mechanisms of Seed Development and Oil Biosynthesis in Pecan (Foods (Basel, Switzerland) · 2024Article
- Two Carya Species,Plants (Basel, Switzerland) · 2024Article
- Integrated transcriptomic and lipidomic analysis provides key insights into lipid content changes during pecan (Carya illinoensis) fruit development.The plant genome · 2024Article
- The Comparative Genomics of Botryosphaeriaceae Suggests Gene Families ofJournal of fungi (Basel, Switzerland) · 2024Article
- A chromosome-level genome reveals genome evolution and molecular basis of anthraquinone biosynthesis in Rheum palmatum.BMC plant biology · 2024Article
4 more citing papers are in PubMed but not listed here.
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Authors and funding
27 authors at 9 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundPecan (Carya illinoinensis) and Chinese hickory (C. cathayensis) are important commercially cultivated nut trees in the genus Carya (Juglandaceae), with high nutritional value and substantial health benefits.
resultsWe obtained >187.22 and 178.87 gigabases of sequence, and ∼288× and 248× genome coverage, to a pecan cultivar ("Pawnee") and a domesticated Chinese hickory landrace (ZAFU-1), respectively. The total assembly size is 651.31 megabases (Mb) for pecan and 706.43 Mb for Chinese hickory. Two genome duplication events before the divergence from walnut were found in these species. Gene family analysis highlighted key genes in biotic and abiotic tolerance, oil, polyphenols, essential amino acids, and B vitamins. Further analyses of reduced-coverage genome sequences of 16 Carya and 2 Juglans species provide additional phylogenetic perspective on crop wild relatives.
conclusionsCooperative characterization of these valuable resources provides a window to their evolutionary development and a valuable foundation for future crop improvement.
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