Evidence map›Paper›PMID 31046791›Full record

ArticleVirology journal2019

First detection and genetic characterization of ungulate tetraparvovirus 2 and ungulate tetraparvovirus 4 in special livestock on the Qinghai-Tibet Plateau in China.

Yangyang Pan, Yun Wang, Meng Wang, Qian Zhang, Abdul Rasheed Baloch, Jun Zhou, Jing Ma, Jam Kashif, Gengquan Xu, Libin Wang and 3 more

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.7field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Yangyang PanGansu Agricultural University, College of Veterinary Medicine, Lanzhou, 730070, China.
Yun WangAnning Branch Lanzhou Genegal Hospital, Lanzhou, 730070, China.
Meng WangGansu Agricultural University, College of Veterinary Medicine, Lanzhou, 730070, China.
Qian ZhangGansu Agricultural University, College of Veterinary Medicine, Lanzhou, 730070, China.
Abdul Rasheed BalochUniversity of South Bohemia in České Budějovice, Faculty of Fisheries and Protection of Waters, South Bohemian Research Center of Aquaculture and Biodiversity of Hydrocenoses, Research Institute of Fish Culture and Hydrobiology, Zátiší 728/II, 389 25, Vodňany, Czech Republic.
Jun ZhouAnimal Health and Epidemiology Center in Chengguang District, Lanzhou, 73000, China.
Jing MaAnimal Health and Epidemiology Center in Chengguang District, Lanzhou, 73000, China.
Jam KashifDepartment of Veterinary Medicine, Sindh Agriculture University Tandojam, Tandojam, Pakistan.
Gengquan XuGansu Agricultural University, College of Veterinary Medicine, Lanzhou, 730070, China.
Libin WangGansu Agricultural University, College of Veterinary Medicine, Lanzhou, 730070, China.
Jiangfeng FanGansu Agricultural University, College of Veterinary Medicine, Lanzhou, 730070, China.
Yan CuiGansu Agricultural University, College of Veterinary Medicine, Lanzhou, 730070, China.
Sijiu YuGansu Agricultural University, College of Veterinary Medicine, Lanzhou, 730070, China. sijiuy@126.com.
Gansu Agricultural University · CNChina Animal Health and Epidemiology Center · CNSindh Agriculture University · PKUniversity of South Bohemia in České Budějovice · CZ

Funding

National Natural Science Foundation of China 31702311Natural Science Foundation of Gansu Province No. 17JR5RA141
6 · The paper itself

Abstract

Tetraparvovirus, formerly known as Partetravirus, is a newly discovered genus in the family Parvoviridae that is considered phylogenetically distinct from other parvoviruses. However, nothing is known about the prevalence of Tetraparvovirus in special livestock living on the Qinghai-Tibet Plateau of China, such as Tibetan pigs and Tibetan sheep. A pair of special primers was designed based on the conserved regions in the genome of ungulate tetraparvovirus 2 (P-PARV4) and ungulate tetraparvovirus 4 (O-PARV4) and was used to detect P-PARV4 in domestic pigs and Tibetan pigs and O-PARV4 in ovines and Tibetan sheep. The results showed a 15.59 and 9.38% prevalence of P-PARV4 in domestic pigs (18.96% in Gansu Province and 11.76% in Qinghai Province) and Tibetan pigs (14.28% in Gansu Province and 4.44% in Qinghai Province), respectively, and a 7.31 and 5.20% prevalence of O-PARV4 in ovines (6.61% in Gansu Province and 8.00% in Qinghai Province) and Tibetan sheep (4.55% in Gansu Province and 5.50% in Qinghai Province), respectively. The prevalence of P-PARV4 was 14.76% (31/210) for ≤1-month-old pigs and 10.58% (20/189) for > 1-month-old pigs, and the positive rates of O-PARV4 were 7.65% (18/235) for ≤1-month-old sheep and 5.05% (11/218) for > 1-month-old sheep. The phylogenetic analysis of NS1, VP1, VP2 and the whole PARV4-related provirus genome demonstrated that both P-PARV4 and O-PARV4 sequences in this study were more closely related to the sequences of other strains discovered in the same genus of animals. The identity analyses for the full-length VP2 genomes of O-PARV4 revealed 98.84-100.00% sequence identity among the 7 strains and the previously reported strain, which was 98.60-99.28% for P-PARV4. In the present study, for the first time, we have provided comprehensive information regarding the widespread infection of P-PARV4 and O-PARV4 in special livestock on the Qinghai-Tibet Plateau in China. Our present findings highlight the importance of epidemiologic surveillance to limit the spread of Tetraparvovirus in livestock at high altitudes in China.

Indexed as

Genome, ViralAnimalsChinaLivestockParvoviridae InfectionsParvovirinaePhylogenyPolymerase Chain ReactionPrevalenceSequence Analysis, DNASheepSwineTibetViral ProteinsViral ProteinsQinghai-Tibet plateauTibetan pigTibetan sheepUngulate tetraparvovirus 2Ungulate tetraparvovirus 4

Identifiers

PMID31046791
PMCPMC6498466
OpenAlexW2946868292

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.