Evidence map›Paper›PMID 31044597›Full record

ArticleAIDS research and human retroviruses2019

HIV Transcription Is Independent of Mediator Kinases.

Daniele C Cary, Mona Rheinberger, Ajda Rojc, B Matija Peterlin

Open access · greenAbstract read
In one paragraph

Article in AIDS research and human retroviruses, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
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  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Daniele C CaryDepartment of Medicine, University of California at San Francisco, San Francisco, California.
Mona RheinbergerDepartment of Medicine, University of California at San Francisco, San Francisco, California.
Ajda RojcDepartment of Medicine, University of California at San Francisco, San Francisco, California.
B Matija PeterlinDepartment of Medicine, University of California at San Francisco, San Francisco, California.
University of California, San Francisco · US

Funding

Virology CoreP30AI027763 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI MALLORY O JOHNSON · 1988 to 2026
$93.6M
X-ray Screening and Rapid Structure DeterminationP50GM082250 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KROGAN, NEVAN J · 2007 to 2018
$48.8M
X-ray Screening and Rapid Structure DeterminationP50AI150476 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KROGAN, NEVAN J · 2019 to 2021
$14.4M
TAT TransactivationR01AI049104 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PETERLIN, BORIS MATIJA · 2001 to 2015
$5.3M
TAT TransactivationR01AI125104 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PETERLIN, BORIS MATIJA · 2016 to 2020
$2.0M
NIAID NIH HHS P30 AI027763NIAID NIH HHS P50 AI150476NIAID NIH HHS R01 AI049104NIAID NIH HHS R01 AI125104NIGMS NIH HHS P50 GM082250
6 · The paper itself

Abstract

While the roles in HIV transcription of many cyclin-dependent kinases (CDKs) have been well defined, little is known about the impact of mediator kinases (MDKs), CDK8 and CDK19, in this process. Mediator complexes containing CDK8 or CDK19 repress or activate the expression of selected genes. The aim of this study was to investigate the role of MDKs in HIV transcription. siRNA knockdown of both MDKs had no effect on HIV transcription. This result was confirmed using two MDK inhibitors, Cortistatin A (CA) and Senexin A (SnxA). Furthermore, neither CA nor SnxA inhibited viral reactivation in Jurkat cell models of HIV latency. Taken together, these results indicate that MDKs are not required for HIV transcription.

Indexed as

Cell Line, TumorCyclin-Dependent Kinase 8Cyclin-Dependent KinasesHeLa CellsHIV-1HumansJurkat CellsPolycyclic CompoundsRNA InterferenceRNA, Small InterferingTranscription, GeneticVirus ActivationVirus LatencyCDK19 protein, humanCDK8 protein, humancortistatin ACyclin-Dependent Kinase 8Cyclin-Dependent KinasesPolycyclic CompoundsRNA, Small InterferingCDK19CDK8Cortistatin AHIV transcriptionmediator kinasesSenexin A

Identifiers

PMID31044597
PMCPMC6688115
OpenAlexW2943067064

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.