Evidence map›Paper›PMID 31044171›Full record

ArticleCommunications biology2019

Isolation and mass spectrometry based hydroxyproline mapping of type II collagen derived from

Priti Prasanna Maity, Debabrata Dutta, Sayan Ganguly, Kausik Kapat, Krishna Dixit, Amit Roy Chowdhury, Ramapati Samanta, Narayan Chandra Das, Pallab Datta, Amit Kumar Das and 1 more

Open access · goldAbstract read
In one paragraph

Article in Communications biology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Frontiers in bioengineering and biotechnology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Priti Prasanna Maity *1School of Medical Science and Technology, Indian Institute of Technology Kharagpur, Kharagpur, 721302 India.
Debabrata Dutta *3Department of Biotechnology, Indian Institute of Technology Kharagpur, Kharagpur, 721302 India.
Sayan Ganguly4Rubber Technology Centre, Indian Institute of Technology Kharagpur, Kharagpur, 721302 India.
Kausik Kapat1School of Medical Science and Technology, Indian Institute of Technology Kharagpur, Kharagpur, 721302 India.
Krishna Dixit1School of Medical Science and Technology, Indian Institute of Technology Kharagpur, Kharagpur, 721302 India.
Amit Roy Chowdhury2Centre for Healthcare Science and Technology, Indian Institute of Engineering Science and Technology, Shibpur, Howrah, 711103 India.
Ramapati Samanta3Department of Biotechnology, Indian Institute of Technology Kharagpur, Kharagpur, 721302 India.
Narayan Chandra Das4Rubber Technology Centre, Indian Institute of Technology Kharagpur, Kharagpur, 721302 India.
Pallab Datta2Centre for Healthcare Science and Technology, Indian Institute of Engineering Science and Technology, Shibpur, Howrah, 711103 India.
Amit Kumar Das3Department of Biotechnology, Indian Institute of Technology Kharagpur, Kharagpur, 721302 India.
Santanu Dhara1School of Medical Science and Technology, Indian Institute of Technology Kharagpur, Kharagpur, 721302 India.
Indian Institute of Technology Kharagpur · INIndian Institute of Engineering Science and Technology, Shibpur · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Collagen II (COLII), the most abundant protein in vertebrates, helps maintain the structural and functional integrity of cartilage. Delivery of COLII from animal sources could improve cartilage regeneration therapies. Here we show that COLII can be purified from the Capra ear cartilage, a commonly available bio-waste product, with a high yield. MALDI-MS/MS analysis evidenced post-translational modifications of the signature triplet, Glycine-Proline-Hydroxyproline (G-P-Hyp), in alpha chain of isolated COLII (COLIIA1). Additionally, thirty-two peptides containing 59 Hyp residues and a few G-X-Y triplets with positional alterations of Hyp in COLIIA1 are also identified. Furthermore, we show that an injectable hydrogel formulation containing the isolated COLII facilitates chondrogenic differentiation towards cartilage regeneration. These findings show that COLII can be isolated from Capra ear cartilage and that positional alteration of Hyp in its structural motif, as detected by newly developed mass spectrometric method, might be an early marker of cartilage disorder.

Indexed as

Amino Acid SequenceAnimalsBiomarkersCartilage DiseasesCollagen Type IIEar CartilageGlycineGoatsHydrogelsHydroxyprolineMesenchymal Stem CellsPeptidesProlineProtein ConformationProtein Processing, Post-TranslationalTandem Mass SpectrometryBiomarkersCollagen Type IIGlycineHydrogelsHydroxyprolinePeptidesProlineIsolation, separation and purificationMass spectrometryProteomic analysisSequencingStem cells

Identifiers

PMID31044171
PMCPMC6488623
OpenAlexW2941051675

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.