Evidence map›Paper›PMID 31044156›Full record

ArticleNPJ precision oncology2019

Resistance to paclitaxel is associated with a variant of the gene BCL2 in multiple tumor types.

Rotem Ben-Hamo, Alona Zilberberg, Helit Cohen, Keren Bahar-Shany, Chaim Wachtel, Jacob Korach, Sarit Aviel-Ronen, Iris Barshack, Danny Barash, Keren Levanon and 1 more

Open access · goldAbstract read
In one paragraph

Article in NPJ precision oncology, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 39 citations in OpenAlex.

  1. Review
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  5. Bcl-2 Up-Regulation Mediates Taxane Resistance Downstream of APC Loss.International journal of molecular sciences · 2024
    Article
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  8. Frontiers in pharmacology · 2024
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  9. Review
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  17. Mechanisms of chemotherapy resistance in ovarian cancer.Cancer drug resistance (Alhambra, Calif.) · 2022
    Review
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  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Rotem Ben-Hamo1The Mina and Everard Goodman Faculty of Life Sciences, Bar Ilan University, Ramat-Gan, 52900 Israel.
Alona Zilberberg1The Mina and Everard Goodman Faculty of Life Sciences, Bar Ilan University, Ramat-Gan, 52900 Israel.
Helit Cohen1The Mina and Everard Goodman Faculty of Life Sciences, Bar Ilan University, Ramat-Gan, 52900 Israel.
Keren Bahar-Shany4Sheba Cancer Research Center, Chaim Sheba Medical Center, Ramat-Gan, 52621 Israel.
Chaim Wachtel1The Mina and Everard Goodman Faculty of Life Sciences, Bar Ilan University, Ramat-Gan, 52900 Israel.
Jacob Korach5Department of Gynecologic Oncology, Chaim Sheba Medical Center, Ramat-Gan, 52621 Israel.
Sarit Aviel-Ronen6Department of Pathology, Chaim Sheba Medical Center, Ramat-Gan, 52621 Israel.
Iris Barshack6Department of Pathology, Chaim Sheba Medical Center, Ramat-Gan, 52621 Israel.
Danny Barash9Department of Computer Science, Ben Gurion University of the Negev, Beer Sheva, 84105 Israel.
Keren Levanon4Sheba Cancer Research Center, Chaim Sheba Medical Center, Ramat-Gan, 52621 Israel.ORCID 0000-0002-5122-064X
Sol Efroni1The Mina and Everard Goodman Faculty of Life Sciences, Bar Ilan University, Ramat-Gan, 52900 Israel.ORCID 0000-0001-7927-6349
Bar-Ilan University · ILSheba Medical Center · ILTel Aviv University · ILBen-Gurion University of the Negev · ILBroad Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Paclitaxel, the most commonly used form of chemotherapy, is utilized in curative protocols in different types of cancer. The response to treatment differs among patients. Biological interpretation of a mechanism to explain this personalized response is still unavailable. Since paclitaxel is known to target BCL2 and TUBB1, we used pan-cancer genomic data from hundreds of patients to show that a single-nucleotide variant in the BCL2 sequence can predict a patient's response to paclitaxel. Here, we show a connection between this BCL2 genomic variant, its transcript structure, and protein abundance. We demonstrate these findings in silico, in vitro, in formalin-fixed paraffin-embedded (FFPE) tissue, and in patient lymphocytes. We show that tumors with the specific variant are more resistant to paclitaxel. We also show that tumor and normal cells with the variant express higher levels of BCL2 protein, a phenomenon that we validated in an independent cohort of patients. Our results indicate BCL2 sequence variations as determinants of chemotherapy resistance. The knowledge of individual BCL2 genomic sequences prior to the choice of chemotherapy may improve patient survival. The current work also demonstrates the benefit of community-wide, integrative omics data sources combined with in-lab experimentation and validation sets.

Indexed as

Cancer genomicsHigh-throughput screeningMolecular biology

Identifiers

PMID31044156
PMCPMC6478919
OpenAlexW2941444700

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.