ArticleNature genetics2019
The genome of cultivated peanut provides insight into legume karyotypes, polyploid evolution and crop domestication.
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Article in Nature genetics, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 343 papers.
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343 citing papers in PubMed, 777 citations in OpenAlex.
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- Mapping and Functional Characterization of Homologous Genes AhSUCA06 and AhSUCA16 Underlying Sucrose, Oil and Protein Contents in Peanut (Arachis hypogaea L.).Plant biotechnology journal · 2026Article
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- Peanut genome resource: a functional genomics platform for Arachis hypogaea.Plant & cell physiology · 2026Article
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- Genetic mapping and diagnostic marker development for a co-localization interval conferring resistance to both Aspergillus flavus infection and aflatoxin production in peanut.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Genome-wide identification and gene expression analysis of Formin homology 2 (FH2) genes in peanut.BMC plant biology · 2026Article
283 more citing papers are in PubMed but not listed here.
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Authors and funding
78 authors at 19 institutions in 5 countries.
Weijian ZhuangFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China. weijianz@fafu.edu.cn.ORCID http://orcid.org/0000-0002-1340-5723
Hua ChenFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Meng YangNextomics Biosciences Institute, Wuhan, China.ORCID http://orcid.org/0000-0002-2672-3069
Jianping WangHaixia Institute of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, China.ORCID http://orcid.org/0000-0002-0259-1508
Manish K PandeyCenter of Excellence in Genomics & Systems Biology, International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.ORCID http://orcid.org/0000-0002-4101-6530
Chong ZhangFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.ORCID http://orcid.org/0000-0002-0236-9624
Wen-Chi ChangCollege of Biosciences and Biotechnology, National Cheng Kung University, Tainan, Taiwan.ORCID http://orcid.org/0000-0002-0347-1516
Liangsheng ZhangHaixia Institute of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, China.
Xingtan ZhangHaixia Institute of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, China.
Ronghua TangGuangxi Academy of Agricultural Sciences, Nanning, China.
Vanika GargCenter of Excellence in Genomics & Systems Biology, International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.
Xingjun WangBiotechnology Research Center, Shandong Peanut Research Institute, Shandong Academy of Agricultural Sciences, Shandong, China.ORCID http://orcid.org/0000-0001-5531-7273
Haibao TangHaixia Institute of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, China.ORCID http://orcid.org/0000-0002-3460-8570
Chi-Nga ChowCollege of Biosciences and Biotechnology, National Cheng Kung University, Tainan, Taiwan.
Jinpeng WangNorth China University of Science and Technology, Tangshan, China.
Ye DengFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Depeng WangNextomics Biosciences Institute, Wuhan, China.
Aamir W KhanCenter of Excellence in Genomics & Systems Biology, International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.ORCID http://orcid.org/0000-0001-9734-8123
Qiang YangFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Tiecheng CaiFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Prasad BajajCenter of Excellence in Genomics & Systems Biology, International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.ORCID http://orcid.org/0000-0002-3282-9441
Kangcheng WuFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Baozhu GuoFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Xinyou ZhangHenan Academy of Agricultural Sciences, Zhengzhou, China.
Jingjing LiNextomics Biosciences Institute, Wuhan, China.ORCID http://orcid.org/0000-0002-0142-5495
Fan LiangNextomics Biosciences Institute, Wuhan, China.ORCID http://orcid.org/0000-0003-1556-1436
Jiang HuNextomics Biosciences Institute, Wuhan, China.
Boshou LiaoOil Crops Research Institute of the Chinese Academy of Agricultural Sciences, Wuhan, China.
Shengyi LiuOil Crops Research Institute of the Chinese Academy of Agricultural Sciences, Wuhan, China.ORCID http://orcid.org/0000-0002-4955-4763
Annapurna ChitikineniCenter of Excellence in Genomics & Systems Biology, International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.
Hansong YanHaixia Institute of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, China.
Yixiong ZhengFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Shihua ShanBiotechnology Research Center, Shandong Peanut Research Institute, Shandong Academy of Agricultural Sciences, Shandong, China.
Qinzheng LiuFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Dongyang XieFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Zhenyi WangNorth China University of Science and Technology, Tangshan, China.
Shahid Ali KhanFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.ORCID http://orcid.org/0000-0002-5564-3041
Niaz AliFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Chuanzhi ZhaoBiotechnology Research Center, Shandong Peanut Research Institute, Shandong Academy of Agricultural Sciences, Shandong, China.ORCID http://orcid.org/0000-0001-7465-7425
Xinguo LiBiotechnology Research Center, Shandong Peanut Research Institute, Shandong Academy of Agricultural Sciences, Shandong, China.ORCID http://orcid.org/0000-0003-3277-9808
Ziliang LuoAgronomy Department, University of Florida, Gainesville, FL, USA.ORCID http://orcid.org/0000-0001-8720-0133
Shubiao ZhangFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Ruirong ZhuangFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Ze PengAgronomy Department, University of Florida, Gainesville, FL, USA.ORCID http://orcid.org/0000-0003-1665-3519
Shuaiyin WangFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Gandeka MamadouFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Yuhui ZhuangFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Zifan ZhaoAgronomy Department, University of Florida, Gainesville, FL, USA.ORCID http://orcid.org/0000-0001-5066-6052
Weichang YuGuangdong Provincial Key Laboratory for Plant Epigenetics, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen, China.
Faqian XiongGuangxi Academy of Agricultural Sciences, Nanning, China.
Weipeng QuanNextomics Biosciences Institute, Wuhan, China.
Mei YuanBiotechnology Research Center, Shandong Peanut Research Institute, Shandong Academy of Agricultural Sciences, Shandong, China.
Yu LiFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Huasong ZouFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Han XiaBiotechnology Research Center, Shandong Peanut Research Institute, Shandong Academy of Agricultural Sciences, Shandong, China.ORCID http://orcid.org/0000-0002-5576-4978
Li ZhaFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Junpeng FanNextomics Biosciences Institute, Wuhan, China.ORCID http://orcid.org/0000-0002-9413-408X
Jigao YuNorth China University of Science and Technology, Tangshan, China.
Wenping XieFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Jiaqing YuanNorth China University of Science and Technology, Tangshan, China.
Kun ChenFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Shanshan ZhaoFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Wenting ChuFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Yuting ChenFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Pengchuan SunNorth China University of Science and Technology, Tangshan, China.ORCID http://orcid.org/0000-0002-8999-4894
Fanbo MengNorth China University of Science and Technology, Tangshan, China.
Tao ZhuoFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Yuhao ZhaoNorth China University of Science and Technology, Tangshan, China.
Chunjuan LiBiotechnology Research Center, Shandong Peanut Research Institute, Shandong Academy of Agricultural Sciences, Shandong, China.
Guohao HeTuskegee University, Tuskegee, AL, USA.
Yongli ZhaoTuskegee University, Tuskegee, AL, USA.
Congcong WangZhongkai University of Agriculture and Engineering, Guangzhou, China.
Polavarapu Bilhan KavikishorOsmania University, Hyderabad, India.
Rong-Long PanFujian Provincial Key Laboratory of Plant Molecular and Cell Biology, Oil Crops Research Institute, State Key Laboratory of Ecological Pest Control for Fujian and Taiwan Crops, Fujian Agriculture and Forestry University, Fuzhou, China.
Andrew H PatersonNorth China University of Science and Technology, Tangshan, China.ORCID http://orcid.org/0000-0003-2159-0487
Xiyin WangNorth China University of Science and Technology, Tangshan, China. wangxiyin@vip.sina.com.ORCID http://orcid.org/0000-0003-3454-0374
Ray MingHaixia Institute of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou, China. rayming@illinois.edu.ORCID http://orcid.org/0000-0002-9417-5789
Rajeev K VarshneyCenter of Excellence in Genomics & Systems Biology, International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India. r.k.varshney@cgiar.org.ORCID http://orcid.org/0000-0002-4562-9131
Oil Crops Research Institute · CNNorth China University of Science and Technology · CNNextomics Biosciences (China) · CNShandong Academy of Agricultural Sciences · CNInternational Crops Research Institute for the Semi-Arid Tropics · INFujian Agriculture and Forestry University · CNUniversity of Florida · USChinese Academy of Agricultural Sciences · CNGuangxi Academy of Agricultural Science · CNHenan Academy of Agricultural Sciences · CNNational Cheng Kung University · TWThe University of Western Australia · AUAgricultural Research Service · USNational Tsing Hua University · TWOsmania University · INShenzhen University · CNTuskegee University · USUniversity of Illinois Urbana-Champaign · USZhongkai University of Agriculture and Engineering · CN
Funding
No grant is acknowledged in the PubMed record.
Abstract
High oil and protein content make tetraploid peanut a leading oil and food legume. Here we report a high-quality peanut genome sequence, comprising 2.54 Gb with 20 pseudomolecules and 83,709 protein-coding gene models. We characterize gene functional groups implicated in seed size evolution, seed oil content, disease resistance and symbiotic nitrogen fixation. The peanut B subgenome has more genes and general expression dominance, temporally associated with long-terminal-repeat expansion in the A subgenome that also raises questions about the A-genome progenitor. The polyploid genome provided insights into the evolution of Arachis hypogaea and other legume chromosomes. Resequencing of 52 accessions suggests that independent domestications formed peanut ecotypes. Whereas 0.42-0.47 million years ago (Ma) polyploidy constrained genetic variation, the peanut genome sequence aids mapping and candidate-gene discovery for traits such as seed size and color, foliar disease resistance and others, also providing a cornerstone for functional genomics and peanut improvement.
Indexed as
ArachisChromosome MappingChromosomes, PlantDisease ResistanceDomesticationDroughtsEcotypeEvolution, MolecularGenome, PlantKaryotypePeanut OilPlant BreedingPlant DiseasesPlant Proteins, DietaryPolyploidySeedsPeanut OilPlant Proteins, Dietary
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