Evidence map›Paper›PMID 31043687›Full record

ArticleScientific reports2019

The influence of spatial and temporal resolutions on the analysis of cell-cell interaction: a systematic study for time-lapse microscopy applications.

M C Comes, P Casti, A Mencattini, D Di Giuseppe, F Mermet-Meillon, A De Ninno, M C Parrini, L Businaro, C Di Natale, E Martinelli

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 42 citations in OpenAlex.

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  15. Optimizing Long-Term Live Cell Imaging.Methods in molecular biology (Clifton, N.J.) · 2022
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  18. Oncoimmunology Meets Organs-on-Chip.Frontiers in molecular biosciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

M C ComesDepartment of Electronic Engineering, University of Rome Tor Vergata, Rome, Italy.
P CastiDepartment of Electronic Engineering, University of Rome Tor Vergata, Rome, Italy.
A MencattiniDepartment of Electronic Engineering, University of Rome Tor Vergata, Rome, Italy.ORCID http://orcid.org/0000-0002-3753-0457
D Di GiuseppeDepartment of Electronic Engineering, University of Rome Tor Vergata, Rome, Italy.
F Mermet-MeillonInstitute Curie, Centre de Recherche, Paris Sciences et Lettres Research University, 75005, Paris, France.
A De NinnoDepartment of Civil Engineering and Computer Science, University of Rome Tor Vergata, 00133, Rome, Italy.
M C ParriniInstitute Curie, Centre de Recherche, Paris Sciences et Lettres Research University, 75005, Paris, France.
L BusinaroInstitute for Photonics and Nanotechnology, Italian National Research Council, 00156, Rome, Italy.
C Di NataleDepartment of Electronic Engineering, University of Rome Tor Vergata, Rome, Italy.
E MartinelliDepartment of Electronic Engineering, University of Rome Tor Vergata, Rome, Italy. martinelli@ing.uniroma2.it.
University of Rome Tor Vergata · ITInstitut Curie · FRNational Research Council · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cell-cell interactions are an observable manifestation of underlying complex biological processes occurring in response to diversified biochemical stimuli. Recent experiments with microfluidic devices and live cell imaging show that it is possible to characterize cell kinematics via computerized algorithms and unravel the effects of targeted therapies. We study the influence of spatial and temporal resolutions of time-lapse videos on motility and interaction descriptors with computational models that mimic the interaction dynamics among cells. We show that the experimental set-up of time-lapse microscopy has a direct impact on the cell tracking algorithm and on the derived numerical descriptors. We also show that, when comparing kinematic descriptors in two diverse experimental conditions, too low resolutions may alter the descriptors' discriminative power, and so the statistical significance of the difference between the two compared distributions. The conclusions derived from the computational models were experimentally confirmed by a series of video-microscopy acquisitions of co-cultures of unlabelled human cancer and immune cells embedded in 3D collagen gels within microfluidic devices. We argue that the experimental protocol of acquisition should be adapted to the specific kind of analysis involved and to the chosen descriptors in order to derive reliable conclusions and avoid biasing the interpretation of results.

Indexed as

AlgorithmsCell CommunicationBreast NeoplasmsCell TrackingComputer SimulationFemaleHumansLeukocytes, MononuclearMicroscopy, VideoSpatio-Temporal AnalysisTime-Lapse Imaging

Identifiers

PMID31043687
PMCPMC6494897
OpenAlexW2943011330

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.