Evidence map›Paper›PMID 31043676›Full record

ArticleScientific reports2019

Mouse models and strain-dependency of Chédiak-Higashi syndrome-associated neurologic dysfunction.

Adam Hedberg-Buenz, Laura M Dutca, Demelza R Larson, Kacie J Meyer, Dana A Soukup, Carly J van der Heide, Hannah E Mercer, Kai Wang, Michael G Anderson

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Chedíak-Higashi Syndrome: Hair-to-toe spectrum.Seminars in pediatric neurology · 2024
    Review
  3. Spectrum ofJournal of medical genetics · 2024
    Review
  4. Article
  5. Article
  6. Lysosomal size matters.Traffic (Copenhagen, Denmark) · 2020
    Review
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Adam Hedberg-BuenzVA Center for the Prevention and Treatment of Visual Loss, Iowa City VA Health Care System, Iowa City, IA, 52246, USA.
Laura M DutcaVA Center for the Prevention and Treatment of Visual Loss, Iowa City VA Health Care System, Iowa City, IA, 52246, USA.
Demelza R LarsonDepartment of Molecular Physiology and Biophysics, The University of Iowa, Iowa City, IA, 52242, USA.
Kacie J MeyerDepartment of Molecular Physiology and Biophysics, The University of Iowa, Iowa City, IA, 52242, USA.
Dana A SoukupDepartment of Molecular Physiology and Biophysics, The University of Iowa, Iowa City, IA, 52242, USA.
Carly J van der HeideDepartment of Molecular Physiology and Biophysics, The University of Iowa, Iowa City, IA, 52242, USA.
Hannah E MercerDepartment of Molecular Physiology and Biophysics, The University of Iowa, Iowa City, IA, 52242, USA.
Kai WangDepartment of Biostatistics, The University of Iowa, Iowa City, IA, 52242, USA.
Michael G AndersonVA Center for the Prevention and Treatment of Visual Loss, Iowa City VA Health Care System, Iowa City, IA, 52246, USA. michael-g-anderson@uiowa.edu.
University of Iowa · USIowa City VA Health Care System · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007337 · NIGMS · UNIVERSITY OF IOWA · PI GEYER, PAMELA K., LENTZ, STEVEN R · 1985 to 2020
$15.9M
Stem Cell and Organoid CoreP30EY025580 · NEI · UNIVERSITY OF IOWA · PI Robert Foster Mullins · 2016 to 2026
$6.9M
Diabetes Research Training Program Diversity SupplementT32DK112751 · NIDDK · UNIVERSITY OF IOWA · PI Andrew W Norris · 2017 to 2026
$4.8M
Genetic dissection of pigment dispersing iris diseaseR01EY017673 · NEI · UNIVERSITY OF IOWA · PI ANDERSON, MICHAEL G · 2008 to 2017
$3.1M
Fatty Acid Defects & Oxidative Stress Modulate Islet Function in Cystic FibrosisR01DK097820 · NIDDK · UNIVERSITY OF IOWA · PI NORRIS, ANDREW W, UC, ALIYE · 2012 to 2016
$1.9M
Genetic modifiers of Cep290-mediated retinal degenerationR21EY029609 · NEI · UNIVERSITY OF IOWA · PI ANDERSON, MICHAEL G · 2018 to 2019
$419k
Therapy of Nocturnal Intraocular Pressure Elevation Causing Glaucoma ProgressionI01RX001481 · VA · IOWA CITY VA MEDICAL CENTER · PI ANDERSON, MICHAEL G · 2015 to 2019
–
Mechanisms of neuronal dysfunction in mild traumatic brain injuryIK2RX002003 · VA · IOWA CITY VA MEDICAL CENTER · PI DUTCA, LAURA MIRELA · 2016 to 2020
–
NEI NIH HHS P30 EY025580NEI NIH HHS R01 EY017673NEI NIH HHS R21 EY029609NIDDK NIH HHS R01 DK097820NIDDK NIH HHS T32 DK112751NIGMS NIH HHS T32 GM007337RRD VA I01 RX001481RRD VA IK2 RX002003U.S. Department of Health & Human Services | NIH | Office of Extramural Research, National Institutes of Health (OER) T32DK112751
6 · The paper itself

Abstract

Chédiak-Higashi syndrome (CHS) is a lethal disorder caused by mutations in the LYST gene that involves progressive neurologic dysfunction. Lyst-mutant mice exhibit neurologic phenotypes that are sensitive to genetic background. On the DBA/2J-, but not on the C57BL/6J-background, Lyst-mutant mice exhibit overt tremor phenotypes associated with loss of cerebellar Purkinje cells. Here, we tested whether assays for ataxia could measure this observed strain-dependency, and if so, establish parameters for empowering phenotype- and candidate-driven approaches to identify genetic modifier(s). A composite phenotypic scoring system distinguished phenotypes in Lyst-mutants and uncovered a previously unrecognized background difference between wild-type C57BL/6J and DBA/2J mice. Accelerating rotarod performance also distinguished phenotypes in Lyst-mutants, but at more advanced ages. These results establish that genetic background, Lyst genotype, and age significantly influence the severity of CHS-associated neurologic deficits. Purkinje cell quantifications likewise distinguished phenotypes of Lyst-mutant mice, as well as background differences between wild-type C57BL/6J and DBA/2J mice. To aid identification of potential genetic modifier genes causing these effects, we searched public datasets for cerebellar-expressed genes that are differentially expressed and/or contain potentially detrimental genetic variants. From these approaches, Nos1, Prdx2, Cbln3, Gnb1, Pttg1 were confirmed to be differentially expressed and leading candidates.

Indexed as

MutationAnimalsCerebellar AtaxiaChediak-Higashi SyndromeDisease Models, AnimalFemaleGenotypeMiceMice, Inbred C57BLMice, Inbred DBANervous System DiseasesPhenotype

Identifiers

PMID31043676
PMCPMC6494809
OpenAlexW2943175553

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.