Evidence map›Paper›PMID 31043568›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2019

Family of neural wiring receptors in bilaterians defined by phylogenetic, biochemical, and structural evidence.

Shouqiang Cheng, Yeonwoo Park, Justyna D Kurleto, Mili Jeon, Kai Zinn, Joseph W Thornton, Engin Özkan

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.4field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 32 citations in OpenAlex.

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  13. Structure and evolution of neuronal wiring receptors and ligands.Developmental dynamics : an official publication of the American Association of Anatomists · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Shouqiang ChengDepartment of Biochemistry and Molecular Biology, The University of Chicago, Chicago, IL 60637.
Yeonwoo ParkCommittee on Genetics, Genomics and Systems Biology, The University of Chicago, Chicago, IL 60637.
Justyna D KurletoDepartment of Biochemistry and Molecular Biology, The University of Chicago, Chicago, IL 60637.
Mili JeonDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125.
Kai ZinnDivision of Biology and Biological Engineering, California Institute of Technology, Pasadena, CA 91125.
Joseph W ThorntonCommittee on Genetics, Genomics and Systems Biology, The University of Chicago, Chicago, IL 60637.
Engin ÖzkanDepartment of Biochemistry and Molecular Biology, The University of Chicago, Chicago, IL 60637; eozkan@uchicago.edu.ORCID 0000-0002-0263-6729
University of Chicago · USCalifornia Institute of Technology · USJagiellonian University · PL

Funding

User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI Nozomi Ando, J Christopher Fromme · 2018 to 2026
$34.2M
X-ray Absorption Spectroscopy (XAS) pp.711-759P41GM103393 · NIGMS · STANFORD UNIVERSITY · PI HODGSON, KEITH O · 2012 to 2019
$30.6M
MOLECULAR GENETICS OF DROSOPHILA CNS DEVELOPMENTR01NS028182 · NINDS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI Engin Ozkan, KAI G ZINN · 1990 to 2026
$7.3M
Molecular Genetics of CNS DevelopmentR37NS028182 · NINDS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI ZINN, KAI G · 2014 to 2020
$3.3M
Pixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8M
Regulation of synaptic targeting in the Drosophila larval neuromuscular system by immunoglobulin superfamily cell surface proteinsR01NS096509 · NINDS · CALIFORNIA INSTITUTE OF TECHNOLOGY · PI ZINN, KAI G · 2016 to 2020
$1.8M
Molecular Recognition Principles, Engineering and Function of Neural Wiring ReceptorsR01NS097161 · NINDS · UNIVERSITY OF CHICAGO · PI OZKAN, ENGIN · 2016 to 2020
$1.8M
Deep characterization of the sequence space and evolutionary trajectories of reconstructed ancestral proteins - Resubmission 01R01GM121931 · NIGMS · UNIVERSITY OF CHICAGO · PI THORNTON, JOSEPH W · 2017 to 2020
$1.3M
Evolution of molecular complexes: genetic, structural, and functional mechanisms for the evolution of oligomers and allosteryR01GM131128 · NIGMS · UNIVERSITY OF CHICAGO · PI THORNTON, JOSEPH W · 2019 to 2021
$904k
NCRR NIH HHS S10 RR029205NIGMS NIH HHS P30 GM124165NIGMS NIH HHS P41 GM103393NIGMS NIH HHS R01 GM121931NIGMS NIH HHS R01 GM131128NINDS NIH HHS R01 NS028182NINDS NIH HHS R01 NS096509NINDS NIH HHS R01 NS097161NINDS NIH HHS R37 NS028182
6 · The paper itself

Abstract

The evolution of complex nervous systems was accompanied by the expansion of numerous protein families, including cell-adhesion molecules, surface receptors, and their ligands. These proteins mediate axonal guidance, synapse targeting, and other neuronal wiring-related functions. Recently, 32 interacting cell surface proteins belonging to two newly defined families of the Ig superfamily (IgSF) in fruit flies were discovered to label different subsets of neurons in the brain and ventral nerve cord. They have been shown to be involved in synaptic targeting and morphogenesis, retrograde signaling, and neuronal survival. Here, we show that these proteins, Dprs and DIPs, are members of a widely distributed family of two- and three-Ig domain molecules with neuronal wiring functions, which we refer to as Wirins. Beginning from a single ancestral Wirin gene in the last common ancestor of Bilateria, numerous gene duplications produced the heterophilic Dprs and DIPs in protostomes, along with two other subfamilies that diversified independently across protostome phyla. In deuterostomes, the ancestral Wirin evolved into the IgLON subfamily of neuronal receptors. We show that IgLONs interact with each other and that their complexes can be broken by mutations designed using homology models based on Dpr and DIP structures. The nematode orthologs ZIG-8 and RIG-5 also form heterophilic and homophilic complexes, and crystal structures reveal numerous apparently ancestral features shared with Dpr-DIP complexes. The evolutionary, biochemical, and structural relationships we demonstrate here provide insights into neural development and the rise of the metazoan nervous system.

Indexed as

Biological EvolutionImmunoglobulinsNervous SystemAnimalsDimerizationDrosophila melanogasterInvertebratesMultigene FamilyProtein ConformationImmunoglobulinsDpr-DIP familyIgLONimmunoglobulin superfamilymolecular evolutionnervous system

Identifiers

PMID31043568
PMCPMC6525511
OpenAlexW2943739163

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.