Evidence map›Paper›PMID 31043519›Full record

ArticlemSphere2019

A Tripartite, Hierarchical Sigma Factor Cascade Promotes Hormogonium Development in the Filamentous Cyanobacterium Nostoc punctiforme.

Alfonso Gonzalez, Kelsey W Riley, Thomas V Harwood, Esthefani G Zuniga, Douglas D Risser

Open access · goldAbstract read
In one paragraph

Article in mSphere, 2019. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
7.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 42 citations in OpenAlex.

  1. Environmental Adaptation inPlants (Basel, Switzerland) · 2026
    Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Hormogonium Development and Motility in Filamentous Cyanobacteria.Applied and environmental microbiology · 2023
    Review
  18. Transcriptomic and photosynthetic analyses ofFrontiers in plant science · 2023
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Alfonso GonzalezDepartment of Biology, University of the Pacific, Stockton, California, USA.
Kelsey W RileyDepartment of Biology, University of the Pacific, Stockton, California, USA.
Thomas V HarwoodDepartment of Biology, University of the Pacific, Stockton, California, USA.
Esthefani G ZunigaDepartment of Biology, University of the Pacific, Stockton, California, USA.
Douglas D RisserDepartment of Biology, University of the Pacific, Stockton, California, USA drisser@pacific.edu.ORCID 0000-0003-1981-0049
University of the Pacific · US

Funding

Pacific Biosciences PacBio RS Single Molecule Real Time SequencerS10OD018174 · OD · UNIVERSITY OF CALIFORNIA BERKELEY · PI ROKHSAR, DANIEL SOLEYMAN · 2014 to 2014
$600k
NIH HHS S10 OD018174
6 · The paper itself

Abstract

Cyanobacteria are prokaryotes capable of oxygenic photosynthesis, and frequently, nitrogen fixation as well. As a result, they contribute substantially to global primary production and nitrogen cycles. Furthermore, the multicellular filamentous cyanobacteria in taxonomic subsections IV and V are developmentally complex, exhibiting an array of differentiated cell types and filaments, including motile hormogonia, making them valuable model organisms for studying development. To investigate the role of sigma factors in the gene regulatory network (GRN) controlling hormogonium development, a combination of genetic, immunological, and time-resolved transcriptomic analyses were conducted in the model filamentous cyanobacterium

Indexed as

Bacterial ProteinsDNA-Binding ProteinsFimbriae, BacterialGene Expression ProfilingGene Expression Regulation, BacterialNostocRegulonSigma FactorBacterial ProteinsDNA-Binding ProteinsFliA protein, BacteriasigC protein, BacteriaSigma Factordevelopmentgliding motilityhormogoniaNostoc punctiformesigma factorstype IV pili

Identifiers

PMID31043519
PMCPMC6495340
OpenAlexW2943526079

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.